RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 MMP25Q9NPA2 562 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 ZNF71Q9NQZ8 489 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-228ENST00000511676 VNN3Q9NY84 501 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 PDP1Q9P0J1 537 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-228ENST00000511676 KIF17Q9P2E2 1029 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 TMEFF2Q9UIK5 374 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-228ENST00000511676 TCFL5Q9UL49 500 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 MGAT4BQ9UQ53 548 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 PTRH2Q9Y3E5 179 aaKnown RBP8.37□□□□□ -1.07
NR1I3-228ENST00000511676 CHST2Q9Y4C5 530 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 TESMINQ9Y4I5 508 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 KCNMB2Q9Y691 235 aa8.37□□□□□ -1.07
NR1I3-228ENST00000511676 SH3PXD2BA1X283 911 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 TRAPPC13A5PLN9 417 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 SERINC4A6NH21 518 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ALG1L2C9J202 215 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 E9PQ18 207 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 M0R3H8 397 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 SCDO00767 359 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 NKX2-8O15522 239 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 EIF4E2O60573 245 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 UGT2B11O75310 529 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 HPP00738 406 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 HPGDP15428 266 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 TNFRSF1BP20333 461 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 GSTM3P21266 225 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 CBLP22681 906 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 MYF6P23409 242 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ELAVL4P26378 380 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 IL12BP29460 328 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 RBM34P42696 430 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 CDH12P55289 794 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ESRRGP62508 458 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ADARB1P78563 741 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 PLCXD2Q0VAA5 305 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 NPTX1Q15818 432 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 MAPK14Q16539 360 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 DCST1Q5T197 706 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 OTUD3Q5T2D3 398 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 PDZK1Q5T2W1 519 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 FNDC7Q5VTL7 733 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 LCN10Q6JVE6 187 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 FIGNL1Q6PIW4 674 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 DEF8Q6ZN54 512 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 USP51Q70EK9 711 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 NDUFAF7Q7L592 441 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 NUP54Q7Z3B4 507 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 RAB43Q86YS6 212 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 PRSS58Q8IYP2 241 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 RNF113BQ8IZP6 322 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 SLC43A2Q8N370 569 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ATG16L2Q8NAA4 619 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 SETD9Q8NE22 299 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ZNF555Q8NEP9 628 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 OR10G2Q8NGC3 310 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 OR4D11Q8NGI4 311 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 SLC22A8Q8TCC7 542 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 SSC4DQ8WTU2 575 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 CT55Q8WUE5 264 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ACOT11Q8WXI4 607 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 MIB2Q96AX9 1013 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ZG16BQ96DA0 208 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 HS6ST2Q96MM7 605 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ZNF570Q96NI8 536 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 ALPK1Q96QP1 1244 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 SECISBP2Q96T21 854 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 PITX2Q99697 317 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 MCHR1Q99705 422 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 YTHDF1Q9BYJ9 559 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 C12orf10Q9HB07 376 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 KRT84Q9NSB2 600 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 DNAJB12Q9NXW2 375 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 KCNE5Q9UJ90 142 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 FARSAQ9Y285 508 aaKnown RBP8.36□□□□□ -1.07
NR1I3-228ENST00000511676 PCDHGB6Q9Y5F9 930 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 HS3ST3B1Q9Y662 390 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 FER1L5A0AVI2 2057 aa8.36□□□□□ -1.07
NR1I3-228ENST00000511676 MAST4O15021 2626 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 LOC101059948A0A1B0GTJ6 334 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 PMS2P1A4D2B8 440 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 A8MUA0 341 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 PEX12O00623 359 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 CHP2O43745 196 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 SEMA7AO75326 666 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 PPM1BO75688 479 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 DIRAS1O95057 198 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 UTS2O95399 124 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 CSTAP01040 98 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 UBL4AP11441 157 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 COX6A1P12074 109 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 ABCD3P28288 659 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 CLK3P49761 638 aaKnown RBP8.35□□□□□ -1.07
NR1I3-228ENST00000511676 IST1P53990 364 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 SUMO3P55854 103 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-228ENST00000511676 PER3P56645 1201 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 TAS2R41P59536 307 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 RPP38P78345 283 aaKnown RBP8.35□□□□□ -1.07
NR1I3-228ENST00000511676 ALDH6A1Q02252 535 aaKnown RBP8.35□□□□□ -1.07
NR1I3-228ENST00000511676 TEKQ02763 1124 aa8.35□□□□□ -1.07
NR1I3-228ENST00000511676 CHAF1BQ13112 559 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms