RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 RBMY1DP0C7P1 496 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ABOP16442 354 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 STMN1P16949 149 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ZNF18P17022 549 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 SSTR1P30872 391 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 OPRL1P41146 370 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 SOX3P41225 446 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 OR3A2P47893 321 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 IRX1P78414 480 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 SRSF9Q13242 221 aaKnown RBP eCLIP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 FILIP1LQ4L180 1135 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 OR4C11Q6IEV9 310 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 WDR74Q6RFH5 385 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 IGFL2Q6UWQ7 119 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ARSKQ6UWY0 536 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 NHLRC1Q6VVB1 395 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 OTOAQ7RTW8 1153 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 PIWIL3Q7Z3Z3 882 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 CCDC91Q7Z6B0 441 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 PIGWQ7Z7B1 504 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 HOOK3Q86VS8 718 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ANKRD46Q86W74 232 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 OR7G3Q8NG95 312 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 FIBINQ8TAL6 211 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 TBCKQ8TEA7 893 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 AGAP11Q8TF27 550 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 KIFAP3Q92845 792 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 CCDC47Q96A33 483 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ZNF486Q96H40 463 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 TAAR6Q96RI8 345 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 KLF6Q99612 283 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 OPRPNQ99935 248 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ATG101Q9BSB4 218 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 TDRD1Q9BXT4 1180 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 UCK2Q9BZX2 261 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 LSG1Q9H089 658 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 FBXO44Q9H4M3 255 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 PANK4Q9NVE7 773 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ASIC3Q9UHC3 531 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 SLC12A6Q9UHW9 1150 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 FBXL4Q9UKA2 621 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ZNF835Q9Y2P0 537 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 HERC2O95714 4834 aa2.97□□□□□ -1.93
TOPBP1-208ENST00000511439 ATP8B3O60423 1300 aa2.96□□□□□ -1.93
TOPBP1-208ENST00000511439 ILVBLA1L0T0 632 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 TMEM110-MUSTN1A8MSY1 372 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 H3BMM5 538 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 KPNA3O00505 521 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 SPAG6O75602 509 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 TNFP01375 233 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 DLATP10515 647 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 RALAP11233 206 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 KRT3P12035 628 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ATP6V1E1P36543 226 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 OR3A1P47881 315 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 NPBWR1P48145 328 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 LUMP51884 338 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 XGP55808 180 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 CLDN17P56750 224 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 DCDC1P59894 354 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 KRTAP10-3P60369 221 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 SRP54P61011 504 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 WASHC5Q12768 1159 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 CDH18Q13634 790 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 NFE2L1Q14494 772 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 TAB1Q15750 504 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF789Q5FWF6 425 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 WLSQ5T9L3 541 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 AGAP7PQ5VUJ5 663 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF770Q6IQ21 691 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 KLHL10Q6JEL2 608 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 PLBD1Q6P4A8 553 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 FAM199XQ6PEV8 388 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF497Q6ZNH5 498 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 C17orf82Q86X59 251 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 CROCCP3Q8IVE0 287 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 TUSC5Q8IXB3 177 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 MAPK1IP1LQ8NDC0 245 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 CCDC148Q8NFR7 591 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 OR8H1Q8NGG4 311 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 OR4C15Q8NGM1 316 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 OR6S1Q8NH40 331 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 WFDC5Q8TCV5 224 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 FAM222BQ8WU58 562 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 TMA16Q96EY4 203 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 PPP1R16AQ96I34 528 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ELMO2Q96JJ3 720 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 LINC00479Q96M42 142 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 FAM218AQ96MZ4 157 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF396Q96N95 335 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 AGAP4Q96P64 663 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 TSSK2Q96PF2 358 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 SIGLEC12Q96PQ1 595 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF300Q96RE9 604 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 USP28Q96RU2 1077 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ALKBH7Q9BT30 221 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF350Q9GZX5 532 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 CUEDC2Q9H467 287 aa2.96□□□□□ -1.94
TOPBP1-208ENST00000511439 RAB9BQ9NP90 201 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms