RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CLCF1Q9UBD9 225 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 TRIM33Q9UPN9 1127 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 LIPT1Q9Y234 373 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 AP4B1Q9Y6B7 739 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 MBD3L4A6NDZ8 208 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 MBD3L3A6NE82 208 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 MBD3L5A6NJ08 208 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 LINC01387J3KSC0 135 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 CLIC1O00299 241 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 NUDT7P0C024 238 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 COX6B1P14854 86 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 HOXB9P17482 250 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 PSMA4P25789 261 aaKnown RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 MDH1P40925 334 aaKnown RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 SUMO3P55854 103 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 TFF3Q07654 80 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 FOXF2Q12947 444 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 SKP2Q13309 424 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 FGFBP1Q14512 234 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 MAPK11Q15759 364 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 RPS26P11Q5JNZ5 115 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 EIF3MQ7L2H7 374 aaKnown RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 P4HA3Q7Z4N8 544 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 GGNQ86UU5 652 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 GCNT2Q8N0V5 402 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 RELL2Q8NC24 303 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 ATP6V1C2Q8NEY4 427 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 MBD3L2Q8NHZ7 208 aaPredicted RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 FBXO27Q8NI29 283 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 STON2Q8WXE9 905 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 FIG4Q92562 907 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 WNT2BQ93097 391 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 INTS12Q96CB8 462 aaKnown RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 SIKE1Q9BRV8 207 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 THUMPD3Q9BV44 507 aaKnown RBP12.59□□□□□ -0.39
DDX41-212ENST00000511040 PINK1Q9BXM7 581 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 RABEP2Q9H5N1 569 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 P2RX2Q9UBL9 471 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
DDX41-212ENST00000511040 C7orf72A4D263 438 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 SLC22A20A6NK97 555 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 EIF1AYO14602 144 aaKnown RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 HNRNPRO43390 633 aaKnown RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 ATP8B1O43520 1251 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 EFNA2O43921 213 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 BCHEP06276 602 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 GUSBP08236 651 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 TMIGD3P0DMS9 266 aaPredicted RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 PRKCAP17252 672 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 SHC1P29353 583 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 SFTPDP35247 375 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 PGM1P36871 562 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 EIF1AXP47813 144 aaKnown RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 ARFIP2P53365 341 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 TXNL4AP83876 142 aaKnown RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 CBFBQ13951 182 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 QPRTQ15274 297 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 PPP4R4Q6NUP7 873 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 POMZP3Q6PJE2 187 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 MEX3BQ6ZN04 569 aaKnown RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 ADGRE4PQ86SQ3 457 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 LSRQ86X29 649 aaPredicted RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 TOR1AIP2Q8NFQ8 470 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 SLC38A5Q8WUX1 472 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 MAL2Q969L2 176 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 TM9SF2Q99805 663 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 VAPAQ9P0L0 249 aa12.58□□□□□ -0.4
DDX41-212ENST00000511040 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.58□□□□□ -0.4
DDX41-212ENST00000511040 HEATR5AQ86XA9 2040 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 A0A1W2PP18 115 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 AGAP5A6NIR3 686 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 DVL2O14641 736 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 TNFSF11O14788 317 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 TFPTP0C1Z6 253 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 PRF1P14222 555 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 CTSSP25774 331 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 RYKP34925 604 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 EIF1P41567 113 aaKnown RBP12.57□□□□□ -0.4
DDX41-212ENST00000511040 SLC6A8P48029 635 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 EEFSECP57772 596 aaKnown RBP12.57□□□□□ -0.4
DDX41-212ENST00000511040 IRX1P78414 480 aaPredicted RBP12.57□□□□□ -0.4
DDX41-212ENST00000511040 KCNJ10P78508 379 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 PLAURQ03405 335 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 SNTB1Q13884 538 aaKnown RBP12.57□□□□□ -0.4
DDX41-212ENST00000511040 PON3Q15166 354 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 RGNQ15493 299 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 SGCBQ16585 318 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 SLC25A35Q3KQZ1 300 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 LRIF1Q5T3J3 769 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 LILRA2Q8N149 483 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 C10orf111Q8N326 155 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 FNDC9Q8TBE3 224 aa12.57□□□□□ -0.4
DDX41-212ENST00000511040 CNOT9Q92600 299 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms