RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ZNF787Q6DD87 383 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 DLEU7Q6UYE1 221 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 DNAJC14Q6Y2X3 702 aaPredicted RBP10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 GGNQ86UU5 652 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 C9orf106Q8NAJ2 232 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 TOR1AIP2Q8NFQ8 470 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 OR5W2Q8NH69 310 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 PNPT1Q8TCS8 783 aaKnown RBP10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 TSPEARQ8WU66 669 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 ADGRG7Q96K78 797 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 TRIB1Q96RU8 372 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 RABEP2Q9H5N1 569 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 RUBCNLQ9H714 662 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 MTHFD2LQ9H903 347 aaPredicted RBP10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 ZNF629Q9UEG4 869 aaPredicted RBP10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 TRIM33Q9UPN9 1127 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 VDAC3Q9Y277 283 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 L3MBTL1Q9Y468 752 aa10.59□□□□□ -0.71
HMGXB3-203ENST00000510472 DSPPQ9NZW4 1301 aa10.58□□□□□ -0.71
HMGXB3-203ENST00000510472 PCNX3Q9H6A9 2034 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 A0A0G2JND7 137 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 H0Y3Z8 333 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 GTPBP1O00178 669 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 CLIC1O00299 241 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 NR5A2O00482 541 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 ADAMDEC1O15204 470 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 TGM6O95932 706 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 CSTAP01040 98 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 UBL4AP11441 157 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 NID1P14543 1247 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 PRKCAP17252 672 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 NCF2P19878 526 aaPredicted RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 POU3F2P20265 443 aaPredicted RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 IL11P20809 199 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 EIF1P41567 113 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 RAC1P63000 192 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 KCNJ10P78508 379 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 SLC25A35Q3KQZ1 300 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 C6orf10Q5SRN2 563 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 PLXDC2Q6UX71 529 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 EIF3MQ7L2H7 374 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 DPP10Q8N608 796 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 METTL25Q8N6Q8 603 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 RELL2Q8NC24 303 aaPredicted RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 SLC38A5Q8WUX1 472 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 SPOCK3Q9BQ16 436 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 TMEM120AQ9BXJ8 343 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 QRSL1Q9H0R6 528 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 KCNJ16Q9NPI9 418 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 VAPAQ9P0L0 249 aa10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 GPC6Q9Y625 555 aaPredicted RBP10.58□□□□□ -0.72
HMGXB3-203ENST00000510472 PHF3Q92576 2039 aaKnown RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 NKX2-6A6NCS4 301 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 CLDN24A6NM45 220 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 H3BML4 177 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 SYT5O00445 386 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 HNRNPRO43390 633 aaKnown RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 ADAM11O75078 769 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 ANP32DO95626 131 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 IL18BPO95998 194 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 IL2RAP01589 272 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 NUDT7P0C024 238 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 TROVE2P10155 538 aaKnown RBP eCLIP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 NR2F1P10589 423 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 GPX2P18283 190 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 CTSSP25774 331 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 CRATP43155 626 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 ZNF41P51814 821 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 EEFSECP57772 596 aaKnown RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 DSTNP60981 165 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 FOXF2Q12947 444 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 FADDQ13158 208 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 GPAT3Q53EU6 434 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 RETREG3Q86VR2 466 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 CMIPQ8IY22 773 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 C10orf111Q8N326 155 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 MEIOBQ8N635 442 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 ZNF614Q8N883 585 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 FBXO27Q8NI29 283 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 MRGPRX4Q96LA9 322 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 RNF145Q96MT1 663 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 ZFP3Q96NJ6 502 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 TM9SF2Q99805 663 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 RSPO3Q9BXY4 272 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 IKZF5Q9H5V7 419 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 BCL2L10Q9HD36 194 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 EXOSC3Q9NQT5 275 aaKnown RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 THUMPD1Q9NXG2 353 aaKnown RBP10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 JKAMPQ9P055 326 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 SLC35A3Q9Y2D2 325 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 NOTCH2Q04721 2471 aa10.57□□□□□ -0.72
HMGXB3-203ENST00000510472 A0A0J9YW62 118 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 FAM90A27PA6NNH2 459 aa10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 VIMP08670 466 aaKnown RBP10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 UBTFL6P0CB48 400 aaPredicted RBP10.56□□□□□ -0.72
HMGXB3-203ENST00000510472 ELK4P28324 431 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms