RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TMEM265A0A087WTH1 108 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MBLAC1A4D2B0 266 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ANKRD66B4E2M5 251 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CCDC188H7C350 402 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MANBAO00462 879 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RAB29O14966 203 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MPDU1O75352 247 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CLDN9O95484 217 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RAB40ALP0C0E4 278 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ACSM4P0C7M7 580 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 OGNP20774 298 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CXCR2P25025 360 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 THBS2P35442 1172 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 AVPR1BP47901 424 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 GSSP48637 474 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 COMPP49747 757 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 PRR5P85299 388 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 DEFA6Q01524 100 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MTF1Q14872 753 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SF3A2Q15428 464 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 GLYR1Q49A26 553 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 NDUFAF5Q5TEU4 345 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 FAM45BPQ6NSW5 357 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 PLBD1Q6P4A8 553 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MOB3BQ86TA1 216 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 PHF13Q86YI8 300 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 FAM217AQ8IXS0 508 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 KLHL36Q8N4N3 616 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 GBGT1Q8N5D6 347 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 OLIG1Q8TAK6 271 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 LNX1Q8TBB1 728 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 FAM45AQ8TCE6 357 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RAET1EQ8TD07 263 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RNASE8Q8TDE3 154 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 C2CD4CQ8TF44 421 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 TMIGD2Q96BF3 282 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 C9orf72Q96LT7 481 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MAGEB18Q96M61 343 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 PBDC1Q9BVG4 233 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ACTR6Q9GZN1 396 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 NUAK2Q9H093 628 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ARMC7Q9H6L4 198 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ONECUT1Q9UBC0 465 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 LTBP2Q14767 1821 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 KIAA1671Q9BY89 1806 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 A1L4Q6 167 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 PRSS46E5RG02 174 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SLC9A3R1O14745 358 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 TFECO14948 347 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RGS5O15539 181 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ITGBL1O95965 494 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 TCF4P15884 667 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ADRA1AP35348 466 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SULT1A2P50226 295 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CDKL1Q00532 357 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ODF4Q2M2E3 257 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 C5orf47Q569G3 176 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MANEAQ5SRI9 462 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MFSD14CQ5VZR4 134 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 AADACL2Q6P093 401 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 TRIM40Q6P9F5 258 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 FBXO16Q8IX29 292 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CMTM8Q8IZV2 173 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 OR52I2Q8NH67 350 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 C9orf43Q8TAL5 461 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SLC35F5Q8WV83 523 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 WDR83Q9BRX9 315 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 C16orf70Q9BSU1 422 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 NMUR2Q9GZQ4 415 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 LHX5Q9H2C1 402 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 S100A14Q9HCY8 104 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 GHRLQ9UBU3 117 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 DUXAA6NLW8 204 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 GATCO43716 136 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 KIAA0513O60268 411 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CST8O60676 142 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SCN2BO60939 215 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 DCKP27707 260 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 HNRNPH1P31943 449 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 TGFBR2P37173 567 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CX3CR1P49238 355 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ASCL1P50553 236 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CLCN4P51793 760 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 HNRNPH2P55795 449 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ZP2Q05996 745 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MICBQ29980 383 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CDNFQ49AH0 187 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 COX19Q49B96 90 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SOHLH1Q5JUK2 328 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 TTLL10Q6ZVT0 673 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 CMC1Q7Z7K0 106 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 RBFAQ8N0V3 343 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 SEMA6DQ8NFY4 1073 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 DOK4Q8TEW6 326 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 FAM71F1Q96KD3 344 aaPredicted RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ATP5SQ99766 215 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 MRPL37Q9BZE1 423 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 NSUN3Q9H649 340 aaKnown RBP3.64□□□□□ -1.83
NEDD4-209ENST00000508871 OR2S2Q9NQN1 319 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms