RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FAF1Q9UNN5 650 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P44-201ENST00000508597 HEMK1Q9Y5R4 338 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P44-201ENST00000508597 COL6A6A6NMZ7 2263 aa5.05□□□□□ -1.6
HMGB1P44-201ENST00000508597 CPAMD8Q8IZJ3 1885 aa5.05□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZZEF1O43149 2961 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CFAP47Q6ZTR5 3102 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 FAM208BQ5VWN6 2430 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 LOC400499M0QZD8 3231 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 RNF103-CHMP3A0A140T963 221 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 A0A1W2PS29 197 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 TMEM247A6NEH6 219 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 FRG2CA6NGY1 282 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 AHRRA9YTQ3 701 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 DPM1O60762 260 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 NKX2-2O95096 273 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CPSF4O95639 269 aaKnown RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 FSHBP01225 129 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CLPSP04118 112 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ABCB1P08183 1280 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ALOX5P09917 674 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ITGAMP11215 1152 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 COX4I1P13073 169 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CAPN3P20807 821 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SLC7A1P30825 629 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CHI3L1P36222 383 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 MAP3K8P41279 467 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CDK9P50750 372 aaKnown RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SSR4P51571 173 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 PNLIPRP2P54317 469 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 POLE2P56282 527 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 MRPS35P82673 323 aaKnown RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 Q0VFX4 171 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 FADDQ13158 208 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 MFAP5Q13361 173 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 EFR3AQ14156 821 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 GNA13Q14344 377 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 LTB4RQ15722 352 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ST3GAL2Q16842 350 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 PIGGQ5H8A4 983 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ACER2Q5QJU3 275 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 C6orf10Q5SRN2 563 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ATP1A1-AS1Q5TC04 95 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 AP1ARQ63HQ0 302 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SAXO2Q658L1 398 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 FAM180BQ6P0A1 224 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 TMEM81Q6P7N7 255 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 DGAT2L6Q6ZPD8 337 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZNF621Q6ZSS3 439 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 C6orf120Q7Z4R8 191 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 DHDDSQ86SQ9 333 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ANKRD46Q86W74 232 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 C9orf40Q8IXQ3 194 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CLECL1Q8IZS7 167 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SLC34A3Q8N130 599 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 METTL25Q8N6Q8 603 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZNF441Q8N8Z8 693 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ADAMTS15Q8TE58 950 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZFP90Q8TF47 636 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 TFAP2CQ92754 450 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 KAT2AQ92830 837 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 VPS33AQ96AX1 596 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 DTNBP1Q96EV8 351 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 GIMAP5Q96F15 307 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SLC35G5Q96KT7 338 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 VSTM2LQ96N03 204 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SECISBP2Q96T21 854 aaKnown RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 HOPXQ9BPY8 73 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SLC35A5Q9BS91 424 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 TRIM4Q9C037 500 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 PAIP1Q9H074 479 aaKnown RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 PIGUQ9H490 435 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CDCP1Q9H5V8 836 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CXorf36Q9H7Y0 433 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 FOLH1BQ9HBA9 442 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 Q9N2J8 555 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SERHLQ9NQF3 203 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 POLE3Q9NRF9 147 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 EXD2Q9NVH0 621 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 FBXO34Q9NWN3 711 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 STMN3Q9NZ72 180 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 CALML5Q9NZT1 146 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 TAGLN3Q9UI15 199 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZNF223Q9UK11 482 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 ING1Q9UK53 422 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 PRDM4Q9UKN5 801 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 LIPT1Q9Y234 373 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 SNX8Q9Y5X2 465 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 NINQ8N4C6 2090 aa5.04□□□□□ -1.6
HMGB1P44-201ENST00000508597 PCSK5Q92824 1860 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TRBV5-3A0A0A0MS03 114 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 LOC100653049A0A140TA62 436 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PRSS29PA6NIE9 313 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 OR6C70A6NIJ9 312 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 A8MUI8 341 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 A8MVJ9 347 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CLIC1O00299 241 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TP53I11O14683 189 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 MRASO14807 208 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TPD52L2O43399 206 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms