RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FBXO8Q9NRD0 319 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FARSBQ9NSD9 589 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FAM118AQ9NWS6 357 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SLC2A6Q9UGQ3 507 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PYCARDQ9ULZ3 195 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 C11orf98E9PRG8 122 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 M0QZ24 198 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LYPLA1O75608 230 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 JUNP05412 331 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 RAB40ALP0C0E4 278 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 UROSP10746 265 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 IL1R2P27930 398 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 BCL6P41182 706 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PTGIRP43119 386 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 EEF1A1P68104 462 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 AFMIDQ63HM1 303 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 KIAA0930Q6ICG6 404 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CDHR3Q6ZTQ4 885 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 GDF7Q7Z4P5 450 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FANCMQ8IYD8 2048 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF619Q8N2I2 560 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SUMF1Q8NBK3 374 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PAPD5Q8NDF8 572 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR56B2PQ8NGI1 322 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR56A3Q8NH54 315 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 RFT1Q96AA3 541 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ARSGQ96EG1 525 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TRMT61AQ96FX7 289 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 KLHL15Q96M94 604 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PIGQQ9BRB3 760 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LMF2Q9BU23 707 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PAPOLGQ9BWT3 736 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CDC42EP4Q9H3Q1 356 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF768Q9H5H4 540 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SSU72Q9NP77 194 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CTPS2Q9NRF8 586 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 VPS29Q9UBQ0 182 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TCFL5Q9UL49 500 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 MEMO1Q9Y316 297 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TRAF6Q9Y4K3 522 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LILRA5A6NI73 299 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC30A6NM36 301 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TOR1AO14656 332 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 RCBTB2O95199 551 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 H6PDO95479 791 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PRLP01236 227 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 IGLV3-27P01718 113 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 C9P02748 559 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ADORA3P0DMS8 318 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 BCKDHAP12694 445 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CBLP22681 906 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TTKP33981 857 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FOLH1Q04609 750 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TRIM25Q14258 630 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 NPTX1Q15818 432 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 NNATQ16517 81 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 MSS51Q4VC12 460 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 DNLZQ5SXM8 178 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 RBM20Q5T481 1227 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ATP1A1-AS1Q5TC04 95 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LIPMQ5VYY2 423 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 HBMQ6B0K9 141 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ANKRD26P1Q6NSI1 321 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM107Q6UX40 140 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf122Q6ZSJ8 110 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ENTHD1Q8IYW4 607 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 VWA5B2Q8N398 1253 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 GPR26Q8NDV2 337 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR5T1Q8NG75 326 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR6Q1Q8NGQ2 317 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OLIG1Q8TAK6 271 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF566Q969W8 418 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SARAFQ96BY9 339 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PGAM5Q96HS1 289 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF285Q96NJ3 590 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 COL21A1Q96P44 957 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CPPED1Q9BRF8 314 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 COPS4Q9BT78 406 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TRIM36Q9NQ86 728 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ABRACLQ9P1F3 81 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 COQ4Q9Y3A0 265 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LOC100509620A0A075B734 347 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TRGV5A0A0B4J1U4 118 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PIGBOS1A0A0B4J2F0 54 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 MDFIC2A0A1B0GVS7 189 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR5H15A6NDH6 313 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR5H14A6NHG9 310 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR5H1A6NKK0 313 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FAM171A2A8MVW0 826 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 H0YGG7 62 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TNFSF11O14788 317 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PCDH17O14917 1159 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 GATCO43716 136 aaKnown RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 JRKO75564 520 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 WNT1P04628 370 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PSMB5P28074 263 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ECI1P42126 302 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 CSRP3P50461 194 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FABP6P51161 128 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 METAP1P53582 386 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms