RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 RNF145Q96MT1 663 aa17.95■□□□□ 0.46
DDR1-259ENST00000507046 TUBA1CQ9BQE3 449 aa17.95■□□□□ 0.46
DDR1-259ENST00000507046 CALHM2Q9HA72 323 aa17.95■□□□□ 0.46
DDR1-259ENST00000507046 A4GALTQ9NPC4 353 aa17.95■□□□□ 0.46
DDR1-259ENST00000507046 GPC6Q9Y625 555 aaPredicted RBP17.95■□□□□ 0.46
DDR1-259ENST00000507046 CAPN7Q9Y6W3 813 aa17.95■□□□□ 0.46
DDR1-259ENST00000507046 BBIP1A8MTZ0 92 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 C5orf58C9J3I9 102 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 SLC22A2O15244 555 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 SEC14L5O43304 696 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 DBIP07108 87 aaKnown RBP17.94■□□□□ 0.46
DDR1-259ENST00000507046 LINGO3P0C6S8 592 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 GP1BBP13224 206 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 IL7RP16871 459 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 RPS4Y1P22090 263 aaKnown RBP17.94■□□□□ 0.46
DDR1-259ENST00000507046 ME2P23368 584 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 ELK4P28324 431 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 LSP1P33241 339 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 PGM1P36871 562 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 SEC24CP53992 1094 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 GNGT1P63211 74 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 KCNJ10P78508 379 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 FOXF1Q12946 379 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 MMEL1Q495T6 779 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 PRAMEF8Q5VWM4 474 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 PRAMEF7Q5VXH5 474 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 DLEU7Q6UYE1 221 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 RETREG3Q86VR2 466 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 FAM71CQ8NEG0 241 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 GPR119Q8TDV5 335 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 ZG16BQ96DA0 208 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 CGREF1Q99674 301 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 TREX2Q9BQ50 279 aaPredicted RBP17.94■□□□□ 0.46
DDR1-259ENST00000507046 FAM107BQ9H098 131 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 KLF2Q9Y5W3 355 aaPredicted RBP17.94■□□□□ 0.46
DDR1-259ENST00000507046 DSPPQ9NZW4 1301 aa17.94■□□□□ 0.46
DDR1-259ENST00000507046 A0A0G2JPF8 293 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 CLCA1A8K7I4 914 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 HSPB2A8KAH6 182 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 HNRNPCL2B2RXH8 293 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 HNRNPCL3B7ZW38 293 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 PRSS44E7EML9 344 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 HNRNPCL1O60812 293 aaKnown RBP17.93■□□□□ 0.46
DDR1-259ENST00000507046 CCDC22O60826 627 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 IL2RAP01589 272 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 NUDT7P0C024 238 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 HNRNPCL4P0DMR1 293 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 PGCP20142 388 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 ADH6P28332 368 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 TIMP3P35625 211 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 RPS3AP61247 264 aaKnown RBP17.93■□□□□ 0.46
DDR1-259ENST00000507046 MAPK11Q15759 364 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 HSPB2Q16082 182 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 LIN52Q52LA3 116 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 COQ5Q5HYK3 327 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 RPS26P11Q5JNZ5 115 aaPredicted RBP17.93■□□□□ 0.46
DDR1-259ENST00000507046 CPLX4Q7Z7G2 160 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 METTL25Q8N6Q8 603 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 BBS10Q8TAM1 723 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 MRGPRX4Q96LA9 322 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 ELAC2Q9BQ52 826 aaKnown RBP17.93■□□□□ 0.46
DDR1-259ENST00000507046 KLHDC3Q9BQ90 382 aa17.93■□□□□ 0.46
DDR1-259ENST00000507046 CPPED1Q9BRF8 314 aaPredicted RBP17.93■□□□□ 0.46
DDR1-259ENST00000507046 THUMPD3Q9BV44 507 aaKnown RBP17.93■□□□□ 0.46
DDR1-259ENST00000507046 EXOSC3Q9NQT5 275 aaKnown RBP17.93■□□□□ 0.46
DDR1-259ENST00000507046 A0A0G2JNJ9 132 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 MBD3L4A6NDZ8 208 aaPredicted RBP17.92■□□□□ 0.46
DDR1-259ENST00000507046 MBD3L3A6NE82 208 aaPredicted RBP17.92■□□□□ 0.46
DDR1-259ENST00000507046 MBD3L5A6NJ08 208 aaPredicted RBP17.92■□□□□ 0.46
DDR1-259ENST00000507046 NID1P14543 1247 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 PRKCAP17252 672 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 GPX2P18283 190 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 SLC6A8P48029 635 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 GYS2P54840 703 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 LARS2Q15031 903 aaKnown RBP17.92■□□□□ 0.46
DDR1-259ENST00000507046 QPRTQ15274 297 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 TRMT5Q32P41 509 aaKnown RBP17.92■□□□□ 0.46
DDR1-259ENST00000507046 RUNDC3AQ59EK9 446 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 SEM1Q6ZVN7 128 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 SNX32Q86XE0 403 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 GRAMD2AQ8IUY3 354 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 CCDC71Q8IV32 467 aaPredicted RBP17.92■□□□□ 0.46
DDR1-259ENST00000507046 OR52P1PQ8NH57 321 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 MBD3L2Q8NHZ7 208 aaPredicted RBP17.92■□□□□ 0.46
DDR1-259ENST00000507046 FBXO27Q8NI29 283 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 POC1BQ8TC44 478 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 TMEM234Q8WY98 164 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 ST8SIA1Q92185 356 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 MAL2Q969L2 176 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 ANKRD27Q96NW4 1050 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 TM9SF2Q99805 663 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 IKZF5Q9H5V7 419 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 Q9UFV3 132 aa17.92■□□□□ 0.46
DDR1-259ENST00000507046 ARHGAP21Q5T5U3 1957 aa17.91■□□□□ 0.46
DDR1-259ENST00000507046 PCNX3Q9H6A9 2034 aa17.91■□□□□ 0.46
DDR1-259ENST00000507046 PTPN13Q12923 2485 aa17.91■□□□□ 0.46
DDR1-259ENST00000507046 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.91■□□□□ 0.46
DDR1-259ENST00000507046 GMNCA6NCL1 334 aa17.91■□□□□ 0.46
DDR1-259ENST00000507046 CLDN24A6NM45 220 aa17.91■□□□□ 0.46
DDR1-259ENST00000507046 FAM90A27PA6NNH2 459 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms