RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 MAPK14Q16539 360 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 TRMT5Q32P41 509 aaKnown RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 PLPPR5Q32ZL2 321 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 DCST1Q5T197 706 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 GCNT6Q5T4J0 391 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 C1orf185Q5T7R7 199 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 SP5Q6BEB4 398 aaPredicted RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 CBLN3Q6UW01 205 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 GTPBP8Q8N3Z3 284 aaPredicted RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 PCYOX1LQ8NBM8 494 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 OR5W2Q8NH69 310 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 ZG16BQ96DA0 208 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 ARSGQ96EG1 525 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 CACYBPQ9HB71 228 aaKnown RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 BCL2L10Q9HD36 194 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 ARMCX1Q9P291 453 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 CAMK2AQ9UQM7 478 aa17.97■□□□□ 0.47
SNX25-204ENST00000506896 KLF2Q9Y5W3 355 aaPredicted RBP17.97■□□□□ 0.47
SNX25-204ENST00000506896 TEX15Q9BXT5 2789 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 CENPVL1A0A0U1RR11 272 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 OR2M5A3KFT3 312 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 C5orf58C9J3I9 102 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 FBP2O00757 339 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 PEPDP12955 493 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 IL7RP16871 459 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 PGM1P36871 562 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 LHX2P50458 406 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 ZSWIM7Q19AV6 140 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 NCCRP1Q6ZVX7 275 aaPredicted RBP17.96■□□□□ 0.47
SNX25-204ENST00000506896 MTDHQ86UE4 582 aaKnown RBP17.96■□□□□ 0.47
SNX25-204ENST00000506896 SNX32Q86XE0 403 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 TMCO5AQ8N6Q1 288 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 FAM71CQ8NEG0 241 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 RP9Q8TA86 221 aaKnown RBP17.96■□□□□ 0.47
SNX25-204ENST00000506896 ZPLD1Q8TCW7 415 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 WDR60Q8WVS4 1066 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 TMEM19Q96HH6 336 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 SH3GL1Q99961 368 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 THUMPD3Q9BV44 507 aaKnown RBP17.96■□□□□ 0.47
SNX25-204ENST00000506896 QRSL1Q9H0R6 528 aaKnown RBP17.96■□□□□ 0.47
SNX25-204ENST00000506896 TMEM38AQ9H6F2 299 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 EXOSC3Q9NQT5 275 aaKnown RBP17.96■□□□□ 0.47
SNX25-204ENST00000506896 FAM53CQ9NYF3 392 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 FAM215AQ9Y5M1 114 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 AP4B1Q9Y6B7 739 aa17.96■□□□□ 0.47
SNX25-204ENST00000506896 PCNX3Q9H6A9 2034 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 LOC100653049A0A140TA62 436 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 MRASO14807 208 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 OIP5O43482 229 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 DNAJA2O60884 412 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 KRT34O76011 436 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 NUDT7P0C024 238 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 LINGO3P0C6S8 592 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 UBTFL6P0CB48 400 aaPredicted RBP17.95■□□□□ 0.46
SNX25-204ENST00000506896 NID1P14543 1247 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 ZNF708P17019 499 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 POU3F2P20265 443 aaPredicted RBP17.95■□□□□ 0.46
SNX25-204ENST00000506896 ADH6P28332 368 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 RNF144AP50876 292 aaPredicted RBP17.95■□□□□ 0.46
SNX25-204ENST00000506896 CLDN18P56856 261 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 EEFSECP57772 596 aaKnown RBP17.95■□□□□ 0.46
SNX25-204ENST00000506896 CDSNQ15517 529 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 ACSF3Q4G176 576 aaPredicted RBP17.95■□□□□ 0.46
SNX25-204ENST00000506896 LIN52Q52LA3 116 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 REP15Q6BDI9 236 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 RTL6Q6ICC9 239 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 MEIOBQ8N635 442 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 BBS10Q8TAM1 723 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 GPR119Q8TDV5 335 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 RND1Q92730 232 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 TTYH2Q9BSA4 534 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 IKZF5Q9H5V7 419 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 GID8Q9NWU2 228 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 COQ3Q9NZJ6 369 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 ZNF337Q9Y3M9 751 aa17.95■□□□□ 0.46
SNX25-204ENST00000506896 GPC6Q9Y625 555 aaPredicted RBP17.95■□□□□ 0.46
SNX25-204ENST00000506896 PRSS44E7EML9 344 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 H0Y3Z8 333 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 EPPINO95925 133 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 THBS1P07996 1170 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 ARAFP10398 606 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 PGCP20142 388 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 GRNP28799 593 aaKnown RBP17.94■□□□□ 0.46
SNX25-204ENST00000506896 SLC6A8P48029 635 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 STARP49675 285 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 CCR4P51679 360 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 PMPCAQ10713 525 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 LARS2Q15031 903 aaKnown RBP17.94■□□□□ 0.46
SNX25-204ENST00000506896 NDUFAF6Q330K2 333 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 REEP3Q6NUK4 255 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 LACC1Q8IV20 430 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 MARVELD2Q8N4S9 558 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 OR52P1PQ8NH57 321 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 MAL2Q969L2 176 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 LRRC58Q96CX6 371 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 MRGPRX4Q96LA9 322 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 ARMC7Q9H6L4 198 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 CALHM2Q9HA72 323 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 ZNF232Q9UNY5 417 aa17.94■□□□□ 0.46
SNX25-204ENST00000506896 IFT52Q9Y366 437 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms