RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MATN1P21941 496 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 UQCRC2P22695 453 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SHC1P29353 583 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 IL12AP29459 219 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 CPOXP36551 454 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 CD79BP40259 229 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 EIF1P41567 113 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 EIF1AXP47813 144 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC6A8P48029 635 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 P2RX1P51575 399 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ART1P52961 327 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 CLNS1AP54105 237 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SIRPAP78324 504 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 FAM27E3Q08E93 113 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 FOXF1Q12946 379 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 FGFBP1Q14512 234 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 TOMM34Q15785 309 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF141Q15928 474 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SGCBQ16585 318 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ARHGAP11BQ3KRB8 267 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC25A53Q5H9E4 307 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SPANXN4Q5MJ08 99 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ANXA8L1Q5VT79 327 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 HHATQ5VTY9 493 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SAXO2Q658L1 398 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ESPNLQ6ZVH7 1005 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 FAM214BQ7L5A3 538 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ANKRD46Q86W74 232 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 CLEC4FQ8N1N0 589 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ANKRD42Q8N9B4 389 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 TOR1AIP2Q8NFQ8 470 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 OR4A15Q8NGL6 344 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 OR2V1Q8NHB1 315 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 RAB3IL1Q8TBN0 382 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 GPR119Q8TDV5 335 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF524Q96C55 264 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 GMPPAQ96IJ6 420 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 MAELQ96JY0 434 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC35G5Q96KT7 338 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 TEX37Q96LM6 180 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 KLHL15Q96M94 604 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 FOXC2Q99958 501 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF350Q9GZX5 532 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 OPN3Q9H1Y3 402 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 PLEKHF2Q9H8W4 249 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 TMBIM4Q9HC24 238 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 AIG1Q9NVV5 245 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 THAP1Q9NVV9 213 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 ELOVL5Q9NYP7 299 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 BTNL2Q9UIR0 455 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 DCTN4Q9UJW0 460 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 CARD8Q9Y2G2 431 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 TESMINQ9Y4I5 508 aa8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 GPC6Q9Y625 555 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-209ENST00000506632 CENPVL1A0A0U1RR11 272 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 SERINC4A6NH21 518 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 H3BNH8 94 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF195O14628 629 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 TNFSF11O14788 317 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 HDAC3O15379 428 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 SIAH2O43255 324 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 CXCL13O43927 109 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 KIAA0513O60268 411 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 FCMRO60667 390 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 SS18L1O75177 396 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 UGT2B17O75795 530 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 SMNDC1O75940 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 OPN1LWP04000 364 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 PRKCAP17252 672 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 ME2P23368 584 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 RNF144AP50876 292 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 MAGOHP61326 146 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 UFM1P61960 85 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 FUT5Q11128 374 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 SKP2Q13309 424 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 NDUFAF6Q330K2 333 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 FAM174BQ3ZCQ3 159 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 PDZK1Q5T2W1 519 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 HBMQ6B0K9 141 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 PAMR1Q6UXH9 720 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 OLIG3Q7RTU3 272 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 SPATA19Q7Z5L4 167 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 LILRA2Q8N149 483 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF610Q8N9Z0 462 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 FAM71CQ8NEG0 241 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 VPS37AQ8NEZ2 397 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 OR6K3Q8NGY3 331 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 OR5W2Q8NH69 310 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 FBXO27Q8NI29 283 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 OIT3Q8WWZ8 545 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 MBD6Q96DN6 1003 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 NEURL3Q96EH8 262 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 MARK4Q96L34 752 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 MRGPRX4Q96LA9 322 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 CCDC115Q96NT0 180 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 WFIKKN1Q96NZ8 548 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 PAIP2Q9BPZ3 127 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 LAT2Q9GZY6 243 aa8.12□□□□□ -1.11
PDLIM5-209ENST00000506632 SAP130Q9H0E3 1048 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms