RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 CNOT9Q92600 299 aaKnown RBP7.42□□□□□ -1.22
COL4A5-208ENST00000505728 UBE2FQ969M7 185 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 TMIGD2Q96BF3 282 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 MPP4Q96JB8 637 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 LRFN5Q96NI6 719 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 CCNL2Q96S94 520 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-208ENST00000505728 PRSS27Q9BQR3 290 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 TEX12Q9BXU0 123 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 NXF5Q9H1B4 397 aaKnown RBP7.42□□□□□ -1.22
COL4A5-208ENST00000505728 CXorf56Q9H5V9 222 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 UBQLN4Q9NRR5 601 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 RASSF1Q9NS23 344 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 FKBP14Q9NWM8 211 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 DNAJB12Q9NXW2 375 aaKnown RBP7.42□□□□□ -1.22
COL4A5-208ENST00000505728 AKAP7Q9P0M2 348 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-208ENST00000505728 ERVK-18Q9QC07 812 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 CTSFQ9UBX1 484 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 PSORS1C1Q9UIG5 152 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 ZMIZ1Q9ULJ6 1067 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 SLC7A7Q9UM01 511 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 PPIEQ9UNP9 301 aaKnown RBP7.42□□□□□ -1.22
COL4A5-208ENST00000505728 TMEM5Q9Y2B1 443 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 NTNG1Q9Y2I2 539 aa7.42□□□□□ -1.22
COL4A5-208ENST00000505728 FASNP49327 2511 aaKnown RBP7.42□□□□□ -1.22
COL4A5-208ENST00000505728 SMG1Q96Q15 3661 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 A0A0B4J2E0 115 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 A0A1B0GX12 115 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 HTR3EA5X5Y0 456 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 EFCAB10A6NFE3 127 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CCDC160A6NGH7 325 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CLCA1A8K7I4 914 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 B4E171 279 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 H3BN98 237 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 MEN1O00255 615 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CHP2O43745 196 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TSPAN2O60636 221 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CPNE3O75131 537 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 REM1O75628 298 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 UTS2O95399 124 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CSTAP01040 98 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 KLK3P07288 261 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 NGFRP08138 427 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 HTR1AP08908 422 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 PRG2P13727 222 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TBXA2RP21731 343 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 PCMT1P22061 227 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CCKBRP32239 447 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TSPAN7P41732 249 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 RBM34P42696 430 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 SMSP52788 366 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 EFNA3P52797 238 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 PNLIPRP2P54317 469 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 SH3BGRP55822 239 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 E2F1Q01094 437 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 PRKCDQ05655 676 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 RAB39AQ14964 217 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 EBPQ15125 230 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 OCLNQ16625 522 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TMEM201Q5SNT2 666 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 MEDAGQ5VYS4 303 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TMEM236Q5W0B7 351 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TMEM205Q6UW68 189 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 PIP4P1Q86T03 277 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 NRMQ8IXM6 262 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CDK20Q8IZL9 346 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 NLGN4XQ8N0W4 816 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 FAM26EQ8N5C1 309 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF321PQ8N8H1 164 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 BMPERQ8N8U9 685 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF441Q8N8Z8 693 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 KDF1Q8NAX2 398 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 NFAM1Q8NET5 270 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 OR13F1Q8NGS4 319 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 OR4C3Q8NH37 302 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF420Q8TAQ5 688 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TEX47Q8TBZ9 253 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TMEM255BQ8WV15 326 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 DNAJA4Q8WW22 397 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 TMEM239Q8WW34 195 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 GGHQ92820 318 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 OSTF1Q92882 214 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 MUL1Q969V5 352 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 GPA33Q99795 319 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 SCNM1Q9BWG6 230 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 POLDIP3Q9BY77 421 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 PRRG3Q9BZD7 231 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 SEMA4CQ9C0C4 833 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 LAT2Q9GZY6 243 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 APMAPQ9HDC9 416 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 EXOSC3Q9NQT5 275 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 IL20Q9NYY1 176 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 CNOT2Q9NZN8 540 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 SELENONQ9NZV5 590 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 RPS6KB2Q9UBS0 482 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 AASSQ9UDR5 926 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 C19orf25Q9UFG5 118 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 RSL24D1Q9UHA3 163 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF223Q9UK11 482 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms