RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NEPROQ6NW34 567 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 ULK3Q6PHR2 472 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 HACD2Q6Y1H2 254 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 NIPA1Q7RTP0 329 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 HSD11B1LQ7Z5J1 315 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 TRIM69Q86WT6 500 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 PLCZ1Q86YW0 608 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 GPR65Q8IYL9 337 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 DND1Q8IYX4 353 aaKnown RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 KIRREL3Q8IZU9 778 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 CMTM8Q8IZV2 173 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 DNAAF3Q8N9W5 541 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 INO80EQ8NBZ0 244 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 OR10H4Q8NGA5 316 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 OR4D10Q8NGI6 311 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 OR52I1Q8NGK6 324 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 MPLKIPQ8TAP9 179 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 STMN2Q93045 179 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 TOP1MTQ969P6 601 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 UBE2E3Q969T4 207 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 FAM131CQ96AQ9 280 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 CCDC126Q96EE4 140 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 ZBED3Q96IU2 234 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 LMLNQ96KR4 655 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 TOX2Q96NM4 488 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 ALS2CR12Q96Q35 445 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 TMEM175Q9BSA9 504 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 CNPY3Q9BT09 278 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 TMEM121Q9BTD3 319 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 PAPOLGQ9BWT3 736 aaKnown RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 HDHD2Q9H0R4 259 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 GOLPH3Q9H4A6 298 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 RNF41Q9H4P4 317 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 ANKRD19PQ9H560 264 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 RANBP3Q9H6Z4 567 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 NHEJ1Q9H9Q4 299 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 LY9Q9HBG7 655 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 ZNF275Q9NSD4 429 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 NRBP2Q9NSY0 501 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 CUTCQ9NTM9 273 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 CYTH4Q9UIA0 394 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 PHF11Q9UIL8 331 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 ZNF229Q9UJW7 825 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 ZNF221Q9UK13 617 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 TMCO1Q9UM00 188 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 BARX2Q9UMQ3 279 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 GAB2Q9UQC2 676 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 PDE10AQ9Y233 779 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 PPP2R2CQ9Y2T4 447 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 EXOSC1Q9Y3B2 195 aaKnown RBP3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 PCDHGB1Q9Y5G3 927 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 MROH7-TTC4A0A0A0MT08 1334 aa3.18□□□□□ -1.9
HMGB1P22-201ENST00000505315 NEURL4Q96JN8 1562 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 SYNJ2O15056 1496 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 IGLV5-37A0A075B6J1 123 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 TRAV6A0A075B6T7 132 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 IGLV5-52A0A0A0MRZ9 124 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 GLTPD2A6NH11 291 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 ZNF587BE7ETH6 402 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 C11orf98E9PRG8 122 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 RAB29O14966 203 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 SIVA1O15304 175 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 TAPBPO15533 448 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 GPAA1O43292 621 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 KDELR3O43731 214 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 CALUO43852 315 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 RAMP3O60896 148 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 SCELO95171 688 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 TMEM50AO95807 157 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 CCL2P13500 99 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 NQO2P16083 231 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 POLR2EP19388 210 aaKnown RBP3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 C4BPBP20851 252 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 EDNRAP25101 427 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 CD82P27701 267 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 DCKP27707 260 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 IL12BP29460 328 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 CD40LGP29965 261 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 CEACAM8P31997 349 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 SLC26A3P40879 764 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 ETV5P41161 510 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 OR3A2P47893 321 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 RFX2P48378 723 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 BRWD1-AS2P59051 145 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 MYL6P60660 151 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 RAB10P61026 200 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 PSMC5P62195 406 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 GSTO1P78417 241 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 LCN2P80188 198 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 TRAF2Q12933 501 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 STX3Q13277 289 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 GPR17Q13304 367 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 ORC2Q13416 577 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 DAZAP2Q15038 168 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 MAPRE2Q15555 327 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 GTDC1Q4AE62 458 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 UNC50Q53HI1 259 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 PPM1LQ5SGD2 360 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 GPR107Q5VW38 600 aa3.17□□□□□ -1.9
HMGB1P22-201ENST00000505315 WSCD1Q658N2 575 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms