RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 PAIP1Q9H074 479 aaKnown RBP8.93□□□□□ -0.98
NR1I3-220ENST00000505005 SLC6A15Q9H2J7 730 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 PIGMQ9H3S5 423 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 A4GALTQ9NPC4 353 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 PNPLA3Q9NST1 481 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-220ENST00000505005 SH3BGRL2Q9UJC5 107 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 FBXL2Q9UKC9 423 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 MKLN1Q9UL63 735 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 EDARQ9UNE0 448 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 CAPN7Q9Y6W3 813 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 FREM3P0C091 2139 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 OR2M5A3KFT3 312 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 MBD3L4A6NDZ8 208 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 MBD3L3A6NE82 208 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 AGAP5A6NIR3 686 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 MBD3L5A6NJ08 208 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ETV2O00321 342 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 DNPH1O43598 174 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ZG16O60844 167 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 DNAJA2O60884 412 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 DCTN3O75935 186 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 RCBTB2O95199 551 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 GOSR1O95249 250 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 H6PDO95479 791 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 GSNP06396 782 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 LINGO3P0C6S8 592 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 NID1P14543 1247 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 CTSSP25774 331 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 CSNK2A1P68400 391 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 HSF1Q00613 529 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 SELENBP1Q13228 472 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 NFYCQ13952 458 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ZSCAN26Q16670 478 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ACSF3Q4G176 576 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 PDZK1Q5T2W1 519 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 GCNT6Q5T4J0 391 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 CCNJQ5T5M9 372 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 RNF220Q5VTB9 566 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 FAM91A1Q658Y4 838 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 OR5M10Q6IEU7 315 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 TYW3Q6IPR3 259 aaKnown RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 CGB2Q6NT52 195 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 C3orf33Q6P1S2 294 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 C5orf46Q6UWT4 87 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 SSX8Q7RTT4 187 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 DHDDSQ86SQ9 333 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 SERPINA11Q86U17 422 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 FUNDC1Q8IVP5 155 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 TMCO5AQ8N6Q1 288 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 C11orf65Q8NCR3 313 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 HIPK4Q8NE63 616 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 TNIP2Q8NFZ5 429 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 OR8J3Q8NGG0 315 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 OR5M9Q8NGP3 310 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 OR9I1Q8NGQ6 314 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 MBD3L2Q8NHZ7 208 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ITLN2Q8WWU7 325 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 CPNE4Q96A23 557 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 SDCCAG3Q96C92 435 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 MARK4Q96L34 752 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 HOPXQ9BPY8 73 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ELAC2Q9BQ52 826 aaKnown RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 USB1Q9BQ65 265 aaKnown RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ECSITQ9BQ95 431 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 INPP5KQ9BT40 448 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 FAM107BQ9H098 131 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 EFCAB1Q9HAE3 211 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 MED17Q9NVC6 651 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 NDE1Q9NXR1 346 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 SELENONQ9NZV5 590 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 SPRR3Q9UBC9 169 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 PLEKHB1Q9UF11 243 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ICAM5Q9UMF0 924 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 ANGPT4Q9Y264 503 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 GCN1Q92616 2671 aaKnown RBP8.92□□□□□ -0.98
NR1I3-220ENST00000505005 BAHCC1Q9P281 2608 aa8.92□□□□□ -0.98
NR1I3-220ENST00000505005 HNRNPRO43390 633 aaKnown RBP8.91□□□□□ -0.98
NR1I3-220ENST00000505005 FCMRO60667 390 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 C8BP07358 591 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 CELA3AP09093 270 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 TFPTP0C1Z6 253 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 GLI4P10075 376 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-220ENST00000505005 PRDX6P30041 224 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 SLC7A1P30825 629 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 PRKAR1BP31321 381 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 CEACAM8P31997 349 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-220ENST00000505005 IFNA8P32881 189 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 LHX2P50458 406 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 CCR4P51679 360 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 DLX5P56178 289 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 RNPS1Q15287 305 aaKnown RBP8.91□□□□□ -0.98
NR1I3-220ENST00000505005 TMEM44Q2T9K0 475 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 TRMT5Q32P41 509 aaKnown RBP8.91□□□□□ -0.98
NR1I3-220ENST00000505005 PLPPR5Q32ZL2 321 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 RUNDC3AQ59EK9 446 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 EMC4Q5J8M3 183 aa8.91□□□□□ -0.98
NR1I3-220ENST00000505005 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms