RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 FSTP19883 344 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 CD40P25942 277 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 IL12BP29460 328 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 STX2P32856 288 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 KRT20P35900 424 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 SRP14P37108 136 aaKnown RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 MAGEA12P43365 314 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 EIF1AXP47813 144 aaKnown RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 ALDH9A1P49189 494 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 CLK3P49761 638 aaKnown RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 FABP6P51161 128 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 CCNG1P51959 295 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 MANFP55145 182 aaKnown RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 CDH15P55291 814 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 CARD18P57730 90 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 RAE1P78406 368 aaKnown RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 PRR5P85299 388 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 PSG6Q00889 435 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 SLC7A5Q01650 507 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 LGALS3BPQ08380 585 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 FOXL1Q12952 345 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 NAB1Q13506 487 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 TSC22D1Q15714 1073 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 AWAT1Q58HT5 328 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 TTC19Q6DKK2 380 aaPredicted RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 HIST2H2BDQ6DRA6 164 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 KLHL17Q6TDP4 642 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 ATG4DQ86TL0 474 aaPredicted RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 C17orf53Q8N3J3 647 aaPredicted RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 BANPQ8N9N5 519 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 SYT14Q8NB59 555 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 OR9A2Q8NGT5 310 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 FAM110BQ8TC76 370 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 DUSP19Q8WTR2 217 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 OSTF1Q92882 214 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 ATP6V1E2Q96A05 226 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 CPNE4Q96A23 557 aaPredicted RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 EFHD2Q96C19 240 aaPredicted RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 MEGF10Q96KG7 1140 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 MUS81Q96NY9 551 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 FOXN4Q96NZ1 517 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 SRA1Q9HD15 236 aaKnown RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 ZDHHC18Q9NUE0 388 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 NPAP1Q9NZP6 1156 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 MED11Q9P086 117 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 TNPO3Q9Y5L0 923 aaKnown RBP5.28□□□□□ -1.56
GYPB-204ENST00000504951 SLC25A15Q9Y619 301 aa5.28□□□□□ -1.56
GYPB-204ENST00000504951 A0A087WV62 115 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 A0A0J9YW62 118 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 POM121CA8CG34 1229 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ZNF724A8MTY0 619 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ALG1L2C9J202 215 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 STX16-NPEPL1H3BU86 382 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 EIF1AYO14602 144 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 STX16O14662 325 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 PDE5AO76074 875 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 OR4F21O95013 312 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 IL33O95760 270 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 IL3P08700 152 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 CREB1P16220 341 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 GGT1P19440 569 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ELK4P28324 431 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 LCN1P31025 176 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 EIF1P41567 113 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 HTR6P50406 440 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 SERPINB8P50452 374 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 CHN2P52757 468 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 PSMD4P55036 377 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 ACTG1P63261 375 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 POU3F1Q03052 451 aaPredicted RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 IFT88Q13099 833 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 GGTLC2Q14390 218 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 PDK3Q15120 406 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ZNF239Q16600 458 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 GGTA1PQ4G0N0 100 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 OR7E24Q6IFN5 339 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 KLC3Q6P597 504 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 NUFIP2Q7Z417 695 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 CCDC91Q7Z6B0 441 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 PEG10Q86TG7 708 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 ZNF433Q8N7K0 673 aaPredicted RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 OR7G2Q8NG99 324 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ZNF483Q8TF39 744 aaPredicted RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 SELENOMQ8WWX9 145 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 HOXB13Q92826 284 aaPredicted RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 EXOSC8Q96B26 276 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 NPAS1Q99742 590 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 SOX7Q9BT81 388 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 MRPL18Q9H0U6 180 aaKnown RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 SLITRK2Q9H156 845 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ELOVL6Q9H5J4 265 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ACSS3Q9H6R3 686 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 AKTIPQ9H8T0 292 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 FKRPQ9H9S5 495 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 GRPEL1Q9HAV7 217 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 FOLH1BQ9HBA9 442 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 TAS2R9Q9NYW1 312 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 NINJ2Q9NZG7 142 aa5.27□□□□□ -1.57
GYPB-204ENST00000504951 ING1Q9UK53 422 aaPredicted RBP5.27□□□□□ -1.57
GYPB-204ENST00000504951 MRTO4Q9UKD2 239 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms