RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 TMEFF2Q9UIK5 374 aaPredicted RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 MCM8Q9UJA3 840 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 PTBP2Q9UKA9 531 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 SLC12A4Q9UP95 1085 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 ZNF281Q9Y2X9 895 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 MTO1Q9Y2Z2 717 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 RNF11Q9Y3C5 154 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 PPIAL4AQ9Y536 164 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 FKBP7Q9Y680 259 aa3.18□□□□□ -1.9
USP46-205ENST00000504078 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.18□□□□□ -1.9
USP46-205ENST00000504078 PRKDCP78527 4128 aaKnown RBP3.18□□□□□ -1.9
USP46-205ENST00000504078 FREM1Q5H8C1 2179 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 A0A1W2PRB8 838 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CIB4A0PJX0 185 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 GOLGA6L10A6NI86 522 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CCT8L1PA6NM43 557 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CXorf49A8MYA2 514 aaPredicted RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 ZNF814B7Z6K7 855 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 FAM157AC9JC47 383 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 H7C417 338 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 DNALI1O14645 258 aaPredicted RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 TO15178 435 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 WISP3O95389 354 aaPredicted RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 UTS2O95399 124 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 ANGPTL1O95841 491 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 SLPIP03973 132 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 ATP1B1P05026 303 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 IL3P08700 152 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CSF3P09919 207 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 NUDT17P0C025 328 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 DHRS4L1P0CG22 281 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 GFAPP14136 432 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 ZNF23P17027 643 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 ADRA2CP18825 462 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 GGT1P19440 569 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 EFNA1P20827 205 aaPredicted RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 ENPP1P22413 925 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CD40P25942 277 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 HSD3B2P26439 372 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 THBS2P35442 1172 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 RBMXP38159 391 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 ANP32AP39687 249 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 PPICP45877 212 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 FNTAP49354 379 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PCYT1AP49585 367 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PRIM2P49643 509 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CCR4P51679 360 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 ZNF75DP51815 510 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CDH15P55291 814 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 TUBA1BP68363 451 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 TUBA4AP68366 448 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PHC1P78364 1004 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 MRPS25P82663 173 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 SRSF4Q08170 494 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 MGAT5Q09328 741 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CSTF3Q12996 717 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 HNRNPA0Q13151 305 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 PPP1R7Q15435 360 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CD226Q15762 336 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 TBCCQ15814 346 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 BCL2A1Q16548 175 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PFKFB4Q16877 469 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PLPPR5Q32ZL2 321 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 C4orf46Q504U0 113 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PRR31Q5SQ13 230 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CCNJQ5T5M9 372 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 TTC19Q6DKK2 380 aaPredicted RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 CCDC137Q6PK04 289 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 C4orf22Q6V702 233 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 Q6ZSR9 355 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 RAPH1Q70E73 1250 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 TUBA1AQ71U36 451 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 FCRLAQ7L513 359 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 EXOC3L1Q86VI1 746 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CARM1Q86X55 608 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 WDR75Q8IWA0 830 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 UBE2J2Q8N2K1 259 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 C1orf52Q8N6N3 182 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 TMCO5AQ8N6Q1 288 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 CDYL2Q8N8U2 506 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 FBXO36Q8NEA4 188 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 RFWD2Q8NHY2 731 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 POC1BQ8TC44 478 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 UBTD2Q8WUN7 234 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 RNF138Q8WVD3 245 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PIK3R3Q92569 461 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PROX1Q92786 737 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 UBE2E3Q969T4 207 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 ZBTB8AQ96BR9 441 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 MTBPQ96DY7 904 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PDLIM5Q96HC4 596 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 EAF1Q96JC9 268 aaPredicted RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 CAPS2Q9BXY5 557 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 TRIM31Q9BZY9 425 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PITHD1Q9GZP4 211 aaPredicted RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 DDX47Q9H0S4 455 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 RHOJQ9H4E5 214 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 PTGES2Q9H7Z7 377 aa3.17□□□□□ -1.9
USP46-205ENST00000504078 DDX31Q9H8H2 851 aaKnown RBP3.17□□□□□ -1.9
USP46-205ENST00000504078 SEC61A2Q9H9S3 476 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms