RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 C6orf47O95873 294 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PLGP00747 810 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CD8AP01732 235 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 OPN1LWP04000 364 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SYPP08247 313 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ITGA5P08648 1049 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 STAG3L1P0CL83 205 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 HLA-DPA1P20036 260 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 LPOP22079 712 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 NDUFS1P28331 727 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CCND3P30281 292 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 BDKRB2P30411 391 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CSF2RBP32927 897 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 THBS2P35442 1172 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 XCR1P46094 333 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PPT1P50897 306 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF140P52738 457 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ART1P52961 327 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PNLIPRP2P54317 469 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 RPS14P62263 151 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 RAB1AP62820 205 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 NRG1Q02297 640 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 POU4F2Q12837 409 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SGCGQ13326 291 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 DDX39BQ13838 428 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ZSWIM7Q19AV6 140 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ALG11Q2TAA5 492 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 GOLGA7BQ2TAP0 167 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 XKR6Q5GH73 641 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ATAT1Q5SQI0 421 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ADGRF1Q5T601 910 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF648Q5T619 568 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 HIST2H3PS2Q5TEC6 136 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 NSUN5P2Q63ZY6 315 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 EIF5AL1Q6IS14 154 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 LPCAT3Q6P1A2 487 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SLC36A1Q7Z2H8 476 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF551Q7Z340 670 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 VTCN1Q7Z7D3 282 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 MRGPREQ86SM8 312 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM200AQ86VY9 491 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 GPSM1Q86YR5 675 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CLEC10AQ8IUN9 316 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PRSS35Q8N3Z0 413 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 OR4F15Q8NGB8 312 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 OR5T3Q8NGG3 340 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 OR4Q3Q8NH05 313 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 STOML3Q8TAV4 291 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PIGXQ8TBF5 258 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SNX33Q8WV41 574 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM203Q969S6 136 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TM4SF18Q96CE8 201 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 LRIG1Q96JA1 1093 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PGLYRP2Q96PD5 576 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TEFMQ96QE5 360 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TRIB3Q96RU7 358 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 MRI1Q9BV20 369 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 FICDQ9BVA6 458 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PBX4Q9BYU1 374 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CHIAQ9BZP6 476 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CHST8Q9H2A9 424 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 GAL3ST2Q9H3Q3 398 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 CCDC86Q9H6F5 360 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 LMAN1LQ9HAT1 526 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 LRTM1Q9HBL6 345 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 NOX3Q9HBY0 568 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 HRASLSQ9HDD0 168 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ACKR4Q9NPB9 350 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ZDHHC4Q9NPG8 344 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SEMA3GQ9NS98 782 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 NRBP2Q9NSY0 501 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 MED17Q9NVC6 651 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 FAM120CQ9NX05 1096 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 OSER1Q9NX31 292 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 EIF2B4Q9UI10 523 aaKnown RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 GDF2Q9UK05 429 aaPredicted RBP5.58□□□□□ -1.52
LINC01340-201ENST00000504012 KCND3Q9UK17 655 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SLC13A4Q9UKG4 626 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 WASF3Q9UPY6 502 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 SLC35A3Q9Y2D2 325 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ATG4BQ9Y4P1 393 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 PCDHB11Q9Y5F2 797 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 TIMM10BQ9Y5J6 103 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 RAI2Q9Y5P3 530 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ENPP4Q9Y6X5 453 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 MIA3Q5JRA6 1907 aa5.58□□□□□ -1.52
LINC01340-201ENST00000504012 ROBO1Q9Y6N7 1651 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 TP53BP1Q12888 1972 aaPredicted RBP5.57□□□□□ -1.52
LINC01340-201ENST00000504012 A0A087WUJ7 227 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 TRAV1-2A0A0B4J238 106 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 A0A1W2PN81 502 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 GNG14A0A1W2PPG7 69 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 LNP1A1A4G5 178 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM150BA6NC51 233 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 A8MWP6 167 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 F8VVB4 439 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 F8VWA3 439 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 GABARAPH6UMI1 98 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 DLEU1O43261 78 aa5.57□□□□□ -1.52
LINC01340-201ENST00000504012 PRODHO43272 600 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms