RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 MIB2Q96AX9 1013 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 ARSGQ96EG1 525 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 C1GALT1C1Q96EU7 318 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 GPATCH1Q9BRR8 931 aaKnown RBP12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 ALG2Q9H553 416 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 ZDHHC11Q9H8X9 412 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 BCL2L10Q9HD36 194 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 QPCTLQ9NXS2 382 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 ALKBH4Q9NXW9 302 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 TNFRSF10DQ9UBN6 386 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 ACAD8Q9UKU7 415 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 USP22Q9UPT9 525 aa12.17□□□□□ -0.46
PGGT1B-204ENST00000503638 DSPPQ9NZW4 1301 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 ELOVL7A1L3X0 281 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 NPIPA2E9PIF3 369 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 NPIPA3F8WFD2 350 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 EIF4E2O60573 245 aaKnown RBP12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 WISP2O76076 250 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 HPNP05981 417 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 TPOP07202 933 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 THBS1P07996 1170 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 PABPC4LP0CB38 370 aaKnown RBP12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 ETS2P15036 469 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 TCN1P20061 433 aaPredicted RBP12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 GNLYP22749 145 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 PTGS2P35354 604 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 P2RX1P51575 399 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 TDGF1P3P51864 188 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 SKP2Q13309 424 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 AAGABQ6PD74 315 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 POMZP3Q6PJE2 187 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 ARSKQ6UWY0 536 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 TRILQ7L0X0 811 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 PATL1Q86TB9 770 aaKnown RBP12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 CMIPQ8IY22 773 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 MICU2Q8IYU8 434 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 PGAM4Q8N0Y7 254 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 SMYD1Q8NB12 490 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 GALNT11Q8NCW6 608 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 ST6GALNAC3Q8NDV1 305 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 TNIP2Q8NFZ5 429 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 OR5W2Q8NH69 310 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 SMPDL3BQ92485 455 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 FIG4Q92562 907 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 ZNF583Q96ND8 569 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 LAT2Q9GZY6 243 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 UBQLN3Q9H347 655 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 MED17Q9NVC6 651 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 RLIMQ9NVW2 624 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 KLHL28Q9NXS3 571 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 PACSIN3Q9UKS6 424 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 OSGIN2Q9Y236 505 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 UTP20O75691 2785 aaKnown RBP12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 NBPF19A0A087WUL8 3843 aa12.16□□□□□ -0.46
PGGT1B-204ENST00000503638 A0A087WZY1 265 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 IGLV3-32A0A0A0MS00 114 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 TRGV8A0A0C4DH27 118 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 SHISA8B8ZZ34 492 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 H3BML4 177 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 HCN1O60741 890 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 SLC19A2O60779 497 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 DNAJA2O60884 412 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 IFNA14P01570 189 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 LINGO3P0C6S8 592 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 GP1BBP13224 206 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 PGCP20142 388 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 POU3F2P20265 443 aaPredicted RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 RPS4Y1P22090 263 aaKnown RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 PGM1P36871 562 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 SLC6A8P48029 635 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 GSK3BP49841 420 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 SUMO3P55854 103 aaPredicted RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 EEFSECP57772 596 aaKnown RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 NCALDP61601 193 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 SRYQ05066 204 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 QPRTQ15274 297 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 SAMD4BQ5PRF9 694 aaKnown RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 RINLQ6ZS11 566 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 CALHM3Q86XJ0 350 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 CADM2Q8N3J6 435 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 RBM15BQ8NDT2 890 aaKnown RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 ATP6V1C2Q8NEY4 427 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 OR5M9Q8NGP3 310 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 NEIL3Q8TAT5 605 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 RELTQ969Z4 430 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 FAM162AQ96A26 154 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 SARAFQ96BY9 339 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 CDRT15Q96T59 188 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 BARD1Q99728 777 aaKnown RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 PIGQQ9BRB3 760 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 OR2B2Q9GZK3 357 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 ACKR4Q9NPB9 350 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 GMPR2Q9P2T1 348 aaKnown RBP12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 ICAM5Q9UMF0 924 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 CAMK2AQ9UQM7 478 aa12.15□□□□□ -0.46
PGGT1B-204ENST00000503638 GPC6Q9Y625 555 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms