RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ATP6V1DQ9Y5K8 247 aa4.45□□□□□ -1.7
NIPBL-203ENST00000503274 MAP1BP46821 2468 aaKnown RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 E9PAM4 449 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 F8VP50 259 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 PDXKO00764 312 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 CALUO43852 315 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 ZNF354AO60765 605 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 APODP05090 189 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 NUDT17P0C025 328 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 OR9G9P0C7N8 305 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 FAM200BP0CF97 657 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 MBL2P11226 248 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 KRT13P13646 458 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 TNFRSF4P43489 277 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 KRTAP10-3P60369 221 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 DMC1Q14565 340 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 OR1C1Q15619 314 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 SMU1Q2TAY7 513 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 ZNF699Q32M78 642 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 VWA2Q5GFL6 755 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 NHLRC3Q5JS37 347 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 EOGTQ5NDL2 527 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 RESP18Q5W5W9 173 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 UNC93AQ86WB7 457 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 CCDC71Q8IV32 467 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 SAMD12Q8N8I0 201 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 TYMSOSQ8TAI1 123 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 SCFD1Q8WVM8 642 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 TAF4BQ92750 862 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 FBXO32Q969P5 355 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 SMARCD1Q96GM5 515 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 BLZF1Q9H2G9 400 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 LINC00597Q9H2U6 94 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 FBXO44Q9H4M3 255 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 AKIRIN1Q9H9L7 192 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 DMAP1Q9NPF5 467 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 GCNT4Q9P109 453 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 TRPC4Q9UBN4 977 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 DSPP15924 2871 aaKnown RBP4.44□□□□□ -1.7
NIPBL-203ENST00000503274 DENND4CQ5VZ89 1909 aa4.44□□□□□ -1.7
NIPBL-203ENST00000503274 ANKRD11Q6UB99 2663 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 MYO18AQ92614 2054 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 LRRD1A4D1F6 860 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CACNB4O00305 520 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 STX10O60499 249 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 ANXA9O76027 345 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 OAS1P00973 400 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CHRNGP07510 517 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CMA1P23946 247 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 RDXP35241 583 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 SYKP43405 635 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 TNFSF10P50591 281 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 KCNK10P57789 538 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 MYL6P60660 151 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 ENPEPQ07075 957 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 SRSF5Q13243 272 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 HEPACAMQ14CZ8 416 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 PCK2Q16822 640 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 WSCD2Q2TBF2 565 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 C1orf189Q5VU69 101 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 LIPJQ5W064 366 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 IYDQ6PHW0 289 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 LPCAT2Q7L5N7 544 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 HIPK1Q86Z02 1210 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 BEST4Q8NFU0 473 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 KIAA1524Q8TCG1 905 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 AGAP11Q8TF27 550 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 UBTD2Q8WUN7 234 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CFAP36Q96G28 342 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 VMP1Q96GC9 406 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 XPO6Q96QU8 1125 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 MRPL45Q9BRJ2 306 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 NTMT1Q9BV86 223 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CXXC4Q9H2H0 198 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CYP3A43Q9HB55 503 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 PRR34Q9NV39 138 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 FAM120CQ9NX05 1096 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CLEC5AQ9NY25 188 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 DEC1Q9P2X7 70 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 LSM7Q9UK45 103 aaKnown RBP4.43□□□□□ -1.7
NIPBL-203ENST00000503274 TP53TG3Q9ULZ0 132 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 MMP17Q9ULZ9 603 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 CACNA1GO43497 2377 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 PTPRJQ12913 1337 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 FRYQ5TBA9 3013 aa4.43□□□□□ -1.7
NIPBL-203ENST00000503274 ZZEF1O43149 2961 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 CFAP47Q6ZTR5 3102 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 TSC2P49815 1807 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 MYH10P35580 1976 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ABCA7Q8IZY2 2146 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 FAM170AA1A519 330 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 SMIM30A4D0T7 59 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 GOLGA6L4A6NEF3 574 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 LRRIQ3A6PVS8 624 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 K7EQS6 105 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 CLDN5O00501 218 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 PHOX2AO14813 284 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 MAPK13O15264 365 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms