RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 VRK2Q86Y07 508 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 PCYOX1LQ8NBM8 494 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 OR52P1PQ8NH57 321 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 OR5W2Q8NH69 310 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 ZBTB8AQ96BR9 441 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 LRRC58Q96CX6 371 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 RCN3Q96D15 328 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 RNF145Q96MT1 663 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 NPAS1Q99742 590 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 CCDC106Q9BWC9 280 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 LAT2Q9GZY6 243 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 ZNF337Q9Y3M9 751 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 FAM215AQ9Y5M1 114 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 GMEB1Q9Y692 573 aa15.2■□□□□ 0.02
TSPAN17-203ENST00000503030 DSPPQ9NZW4 1301 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 AHRRA9YTQ3 701 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 SEC14L5O43304 696 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 LINGO3P0C6S8 592 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 ARAFP10398 606 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 COX4I1P13073 169 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 CPN1P15169 458 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 ZNF708P17019 499 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 RPS4Y1P22090 263 aaKnown RBP15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 RYKP34925 604 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 CLDN18P56856 261 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 NUP107P57740 925 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 CDK6Q00534 326 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 PMPCAQ10713 525 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 FOXF1Q12946 379 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 SCARB2Q14108 478 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 TMEM44Q2T9K0 475 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 ACSF3Q4G176 576 aaPredicted RBP15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 AP1ARQ63HQ0 302 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 TMEM211Q6ICI0 200 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 MRGPRGQ86SM5 289 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 TREML1Q86YW5 311 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 GTPBP8Q8N3Z3 284 aaPredicted RBP15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 OR10Q1Q8NGQ4 319 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 RP9Q8TA86 221 aaKnown RBP15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 BBS10Q8TAM1 723 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 GPR119Q8TDV5 335 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 PHF10Q8WUB8 498 aaKnown RBP15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 CNOT9Q92600 299 aaKnown RBP15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 PMM1Q92871 262 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 TRIB1Q96RU8 372 aa15.19■□□□□ 0.02
TSPAN17-203ENST00000503030 DOPEY2Q9Y3R5 2298 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 A1L4Q6 167 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 WIPF3A6NGB9 483 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 KDM4EB2RXH2 506 aaPredicted RBP15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 LINC01387J3KSC0 135 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 FXYD1O00168 92 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 AIM2O14862 343 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 PGM3O95394 542 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 OPN1LWP04000 364 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 HOXD4P09016 255 aaPredicted RBP15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 GLI4P10075 376 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 PEPDP12955 493 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 NID1P14543 1247 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 ZNF17P17021 662 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 SLC6A2P23975 617 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 PTGER4P35408 488 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 SMSP52788 366 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 LARS2Q15031 903 aaKnown RBP15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 QPRTQ15274 297 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 LIN52Q52LA3 116 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 MRPL2Q5T653 305 aaKnown RBP15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 NANOGP8Q6NSW7 305 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 REEP3Q6NUK4 255 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 ZNF836Q6ZNA1 936 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 PIGWQ7Z7B1 504 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 CMIPQ8IY22 773 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 MEIOBQ8N635 442 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 FAM71CQ8NEG0 241 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 FBXO27Q8NI29 283 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 POC1BQ8TC44 478 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 ITLN2Q8WWU7 325 aaPredicted RBP15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 RND1Q92730 232 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 CCT8L2Q96SF2 557 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 TUBA1CQ9BQE3 449 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 TTYH2Q9BSA4 534 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 MYLK2Q9H1R3 596 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 PIF1Q9H611 641 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 TMEM38AQ9H6F2 299 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 TMEM185BQ9H7F4 350 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 NANOGQ9H9S0 305 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 BCL2L10Q9HD36 194 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 GID8Q9NWU2 228 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 ZNF443Q9Y2A4 671 aaPredicted RBP15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 ARL2BPQ9Y2Y0 163 aa15.18■□□□□ 0.02
TSPAN17-203ENST00000503030 PCNX1Q96RV3 2341 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 C7orf72A4D263 438 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 H0YC42 278 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 PRKCAP17252 672 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 PGCP20142 388 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 AQP1P29972 269 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 EIF1P41567 113 aaKnown RBP15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 TPD52P55327 224 aaPredicted RBP15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 CLDN20P56880 219 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 PLAURQ03405 335 aa15.17■□□□□ 0.02
TSPAN17-203ENST00000503030 SF3B4Q15427 424 aaKnown RBP eCLIP15.17■□□□□ 0.024e-8■■■□□ 16.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms