RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 SYT5O00445 386 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 AP3D1O14617 1153 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 ACOT8O14734 319 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 TFECO14948 347 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 EIF4E2O60573 245 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 ENDOUP21128 410 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 KCNJ5P48544 419 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 P2RX1P51575 399 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 SUMO3P55854 103 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 KLRB1Q12918 225 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 TRAP1Q12931 704 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 CBFBQ13951 182 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 DUSP7Q16829 419 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 IFI44LQ53G44 452 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 MTX3Q5HYI7 312 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 AP1ARQ63HQ0 302 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 TIGD3Q6B0B8 471 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 ENPP6Q6UWR7 440 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 FKBP9P1Q75LS8 142 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 SPATA24Q86W54 205 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 EID3Q8N140 333 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 WDSUB1Q8N9V3 476 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 GEMIN6Q8WXD5 167 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 RSRC1Q96IZ7 334 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 GNRHR2Q96P88 292 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 PTGES2Q9H7Z7 377 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 HHATLQ9HCP6 504 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 EXOSC3Q9NQT5 275 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 DCAF13Q9NV06 445 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 TESQ9UGI8 421 aaKnown RBP12.36□□□□□ -0.43
CPNE1-227ENST00000498056 VDAC3Q9Y277 283 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 SLC9A8Q9Y2E8 581 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 SH3GLB1Q9Y371 365 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 CHST2Q9Y4C5 530 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 ANKUB1A6NFN9 424 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 B4DXG7 233 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 PRKD3O94806 890 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 EPPINO95925 133 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 PRG2P13727 222 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 UQCRBP14927 111 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 NQO1P15559 274 aaKnown RBP12.35□□□□□ -0.43
CPNE1-227ENST00000498056 ADH7P40394 386 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 MAGEA5P43359 124 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 SLC6A8P48029 635 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 SELENOWP63302 87 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 HOXC5Q00444 222 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 FOXO1Q12778 655 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 ELOAQ14241 798 aaKnown RBP12.35□□□□□ -0.43
CPNE1-227ENST00000498056 ZSWIM7Q19AV6 140 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 PLEKHN1Q494U1 663 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-227ENST00000498056 FAM180AQ6UWF9 173 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 DEF8Q6ZN54 512 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 RANBP3LQ86VV4 465 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-227ENST00000498056 SLC22A16Q86VW1 577 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 CARM1Q86X55 608 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 GRAMD2AQ8IUY3 354 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 LACC1Q8IV20 430 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF440Q8IYI8 595 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 FADS6Q8N9I5 356 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 ZFP62Q8NB50 900 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF563Q8TA94 476 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 DTNBP1Q96EV8 351 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 SLC47A1Q96FL8 570 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 ARHGDIGQ99819 225 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 KLHDC3Q9BQ90 382 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 RSPO3Q9BXY4 272 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-227ENST00000498056 LAT2Q9GZY6 243 aa12.35□□□□□ -0.43
CPNE1-227ENST00000498056 TSPAN10Q9H1Z9 355 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-227ENST00000498056 NBEAQ8NFP9 2946 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 IGLV3-32A0A0A0MS00 114 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 TCRBV5S2A0A599 114 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 CFAP73A6NFT4 308 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 ADAM11O75078 769 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 RFPL3SP0C7P2 107 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 PGCP20142 388 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 MSX1P28360 303 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 OR1E2P47887 323 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 PPIAP62937 165 aaKnown RBP12.34□□□□□ -0.43
CPNE1-227ENST00000498056 EPS8Q12929 822 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 FOXF1Q12946 379 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 NFATC3Q12968 1075 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 GANABQ14697 944 aaKnown RBP12.34□□□□□ -0.43
CPNE1-227ENST00000498056 QPRTQ15274 297 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 NRF1Q16656 503 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 RAET1LQ5VY80 246 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 PLEKHM3Q6ZWE6 761 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF550Q7Z398 422 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 CADM2Q8N3J6 435 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 FAM109AQ8N4B1 249 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 TMEM251Q8N6I4 163 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 Q8NA96 180 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 OR5W2Q8NH69 310 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 OR14L1PQ8NHC6 308 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 C1GALT1C1Q96EU7 318 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 SEPHS2Q99611 448 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 CTPS2Q9NRF8 586 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 OLAHQ9NV23 265 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 TAS2R10Q9NYW0 307 aa12.34□□□□□ -0.43
CPNE1-227ENST00000498056 ANAPC2Q9UJX6 822 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms