RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PP2D1A8MPX8 630 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 SNAPINO95295 136 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 INSP01308 110 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 ALPPP05187 535 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 ALPPL2P10696 532 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 AXLP30530 894 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 PLK1P53350 603 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 APOC4P55056 127 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 NTHL1P78549 312 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 GABPB1Q06547 395 aaPredicted RBP2.05□□□□□ -2.08
SMC4-227ENST00000497984 RIPPLY1Q0D2K3 151 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 SLC10A7Q0GE19 358 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 NDUFA9Q16795 377 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 CASC10Q5T4H9 136 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 LIPNQ5VXI9 398 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 CYS1Q717R9 158 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 FAM220AQ7Z4H9 259 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 SYVN1Q86TM6 617 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 KIR2DL5AQ8N109 375 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 ZNF786Q8N393 782 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 FAM71E2Q8N5Q1 922 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 ARIH2OSQ8N7S6 290 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 C15orf54Q8N8G6 183 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 OR5AU1Q8NGC0 362 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 GIPC3Q8TF64 312 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 FAM210BQ96KR6 192 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 VSTM2LQ96N03 204 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 RNF126Q9BV68 326 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 PAK1IP1Q9NWT1 392 aaPredicted RBP2.05□□□□□ -2.08
SMC4-227ENST00000497984 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.05□□□□□ -2.083e-18■■■■■ 78.4
SMC4-227ENST00000497984 WRAP73Q9P2S5 460 aaPredicted RBP2.05□□□□□ -2.08
SMC4-227ENST00000497984 BTNL2Q9UIR0 455 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 ZNF225Q9UK10 706 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 PLLPQ9Y342 182 aa2.05□□□□□ -2.08
SMC4-227ENST00000497984 IGKV2-28A0A075B6P5 120 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 NKX2-6A6NCS4 301 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 OR6C65A6NJZ3 312 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 A8MUA0 341 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 HCRTR1O43613 425 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 TRAF3IP2O43734 574 aaPredicted RBP2.04□□□□□ -2.08
SMC4-227ENST00000497984 ICOSLGO75144 302 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 LALBAP00709 142 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 IGKV2D-28P01615 120 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 RRASP10301 218 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 PRDX3P30048 256 aaKnown RBP2.04□□□□□ -2.08
SMC4-227ENST00000497984 HSPA1LP34931 641 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 PMELP40967 661 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 CSNK1DP48730 415 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 PFN3P60673 137 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 HERVK_113P61574 105 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 CHRNB3Q05901 458 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 ST3GAL3Q11203 375 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 CCDC184Q52MB2 194 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 SLC10A5Q5PT55 438 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 FAHD2BQ6P2I3 314 aaPredicted RBP2.04□□□□□ -2.08
SMC4-227ENST00000497984 SYT10Q6XYQ8 523 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 RNF165Q6ZSG1 346 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 ARCQ7LC44 396 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 KDM8Q8N371 416 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 CERS5Q8N5B7 392 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 FAHD2AQ96GK7 314 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 TBCDQ9BTW9 1192 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 DUSP16Q9BY84 665 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 MAGT1Q9H0U3 335 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 THAP9Q9H5L6 903 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 B3GNT2Q9NY97 397 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 UTP6Q9NYH9 597 aaKnown RBP2.04□□□□□ -2.08
SMC4-227ENST00000497984 ATP6V1HQ9UI12 483 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 NEUROG3Q9Y4Z2 214 aa2.04□□□□□ -2.08
SMC4-227ENST00000497984 HELTA6NFD8 242 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 FAM166BA8MTA8 275 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 NBR2O15453 112 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 RNH1P13489 461 aaKnown RBP2.03□□□□□ -2.08
SMC4-227ENST00000497984 EPHX2P34913 555 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 DLSTP36957 453 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 SUCLG1P53597 346 aaKnown RBP2.03□□□□□ -2.08
SMC4-227ENST00000497984 SLC26A5P58743 744 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 RGS1Q08116 209 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 WASHC5Q12768 1159 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 LAGE3Q14657 143 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 ATXN7L3Q14CW9 347 aaPredicted RBP2.03□□□□□ -2.08
SMC4-227ENST00000497984 NSDHLQ15738 373 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 ADPRMQ3LIE5 342 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 TMEM52BQ4KMG9 183 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 GPR157Q5UAW9 335 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 LANCL3Q6ZV70 420 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 VRK2Q86Y07 508 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 BCORP1Q8N888 145 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 MDS2Q8NDY4 140 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 OR52I1Q8NGK6 324 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 MARCH1Q8TCQ1 289 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 FCGR1BQ92637 280 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 UCN3Q969E3 161 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 OR5B2Q96R09 309 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 SLC17A9Q9BYT1 436 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 ROPN1Q9HAT0 212 aaPredicted RBP2.03□□□□□ -2.08
SMC4-227ENST00000497984 FETUBQ9UGM5 382 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 PRPF19Q9UMS4 504 aaKnown RBP2.03□□□□□ -2.08
SMC4-227ENST00000497984 FOXJ3Q9UPW0 622 aa2.03□□□□□ -2.08
SMC4-227ENST00000497984 PRG3Q9Y2Y8 225 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms