RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 NEURL3Q96EH8 262 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 LRRC37BQ96QE4 947 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 CCDC106Q9BWC9 280 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 PAIP1Q9H074 479 aaKnown RBP13.84□□□□□ -0.19
NUP50-219ENST00000497960 MYLK2Q9H1R3 596 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 SLC52A3Q9NQ40 469 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.84□□□□□ -0.19
NUP50-219ENST00000497960 VDAC3Q9Y277 283 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 AP4B1Q9Y6B7 739 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 PCNX3Q9H6A9 2034 aa13.84□□□□□ -0.19
NUP50-219ENST00000497960 KIAA1549Q9HCM3 1950 aa13.83□□□□□ -0.19
NUP50-219ENST00000497960 SLC22A20A6NK97 555 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 DUXAA6NLW8 204 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 H3BNH8 94 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 MRASO14807 208 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 HCRTR2O43614 444 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 KRT75O95678 551 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 MATN1P21941 496 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 ZNF41P51814 821 aaPredicted RBP13.83□□□□□ -0.2
NUP50-219ENST00000497960 RPS3AP61247 264 aaKnown RBP13.83□□□□□ -0.2
NUP50-219ENST00000497960 FOXF2Q12947 444 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 OR2A2Q6IF42 318 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 PLXDC2Q6UX71 529 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 KIF18BQ86Y91 864 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 LURAP1LQ8IV03 231 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 B4GALNT2Q8NHY0 566 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 SMPDL3BQ92485 455 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 AURKBQ96GD4 344 aaPredicted RBP13.83□□□□□ -0.2
NUP50-219ENST00000497960 SH3YL1Q96HL8 342 aaPredicted RBP13.83□□□□□ -0.2
NUP50-219ENST00000497960 OR7D2Q96RA2 312 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 SLC6A13Q9NSD5 602 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 POLQO75417 2590 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 MPDZO75970 2070 aa13.83□□□□□ -0.2
NUP50-219ENST00000497960 MED12LQ86YW9 2145 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 LOC100653049A0A140TA62 436 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 TNFRSF21O75509 655 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 KRT34O76011 436 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 TGM6O95932 706 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 AK1P00568 194 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 ZCCHC18P0CG32 403 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 COX4I1P13073 169 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 ZNF17P17021 662 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 CPA2P48052 419 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 ANXA11P50995 505 aaKnown RBP13.82□□□□□ -0.2
NUP50-219ENST00000497960 SUCLG1P53597 346 aaKnown RBP13.82□□□□□ -0.2
NUP50-219ENST00000497960 ATP12AP54707 1039 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 CASP9P55211 416 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 KRTAP10-9P60411 292 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 SNTB1Q13884 538 aaKnown RBP13.82□□□□□ -0.2
NUP50-219ENST00000497960 FLYWCH1Q4VC44 716 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 LRIF1Q5T3J3 769 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 TNFAIP8L2Q6P589 184 aaPredicted RBP13.82□□□□□ -0.2
NUP50-219ENST00000497960 RETREG3Q86VR2 466 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 TMEM200AQ86VY9 491 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 RNF130Q86XS8 419 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 TREML1Q86YW5 311 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 ZZZ3Q8IYH5 903 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 GCNT2Q8N0V5 402 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 OR5D16Q8NGK9 328 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 RP9Q8TA86 221 aaKnown RBP13.82□□□□□ -0.2
NUP50-219ENST00000497960 PHOSPHO1Q8TCT1 267 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 ZFP90Q8TF47 636 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 ZBTB8AQ96BR9 441 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 PINK1Q9BXM7 581 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 OR51I1Q9H343 314 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 PIGMQ9H3S5 423 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 MED17Q9NVC6 651 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 PCDHB14Q9Y5E9 798 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 KCNE3Q9Y6H6 103 aa13.82□□□□□ -0.2
NUP50-219ENST00000497960 NPIPA5A0A0B4J1W7 369 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 SHISA8B8ZZ34 492 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 NPIPA7E9PJI5 369 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 GTPBP1O00178 669 aaKnown RBP13.81□□□□□ -0.2
NUP50-219ENST00000497960 FBP2O00757 339 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 CRHP06850 196 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 NPIPA8P0DM63 369 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 CLDN20P56880 219 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 CD226Q15762 336 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 SGCBQ16585 318 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 TMEM44Q2T9K0 475 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 TRMT5Q32P41 509 aaKnown RBP13.81□□□□□ -0.2
NUP50-219ENST00000497960 KLHL26Q53HC5 615 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 COQ5Q5HYK3 327 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 GTPBP8Q8N3Z3 284 aaPredicted RBP13.81□□□□□ -0.2
NUP50-219ENST00000497960 DPP10Q8N608 796 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 ZNF614Q8N883 585 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 FAM222BQ8WU58 562 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 RCN3Q96D15 328 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 CMTM5Q96DZ9 223 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 SERHL2Q9H4I8 314 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 TPT1P8Q9HAU6 139 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 EXD2Q9NVH0 621 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 CRIM1Q9NZV1 1036 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 JKAMPQ9P055 326 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 SLAMF8Q9P0V8 285 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 PACSIN3Q9UKS6 424 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 ZNF175Q9Y473 711 aa13.81□□□□□ -0.2
NUP50-219ENST00000497960 LRBAP50851 2863 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms