RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SAMD8Q96LT4 415 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 EXOSC3Q9NQT5 275 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 PRMT8Q9NR22 394 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 WSB2Q9NYS7 404 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SH2B3Q9UQQ2 575 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 C5orf42Q9H799 3197 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 F5H5P2 479 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 H3BNC9 293 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 FLRT2O43155 660 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 PRAF2O60831 178 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 STX11O75558 287 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 HPP00738 406 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 S100A6P06703 90 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 IFNGR1P15260 489 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 PPP2R1BP30154 601 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 STAT5AP42229 794 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 GCGRP47871 477 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 BLOC1S1P78537 153 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 LYPLAL1Q5VWZ2 237 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 OR7E24Q6IFN5 339 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 RAB12Q6IQ22 244 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 GLDNQ6ZMI3 551 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 POGLUT1Q8NBL1 392 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 OR52N1Q8NH53 320 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 APOBEC4Q8WW27 367 aaKnown RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 PITHD1Q9GZP4 211 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 EQTNQ9NQ60 294 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 MAN2C1Q9NTJ4 1040 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 GREB1Q4ZG55 1949 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 A0A1B0GUH1 482 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 LRIT2A6NDA9 550 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 CRYBA1P05813 215 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 GYPBP06028 91 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 CLTBP09497 229 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 FUT1P19526 365 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 GSTM3P21266 225 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 OR12D2P58182 307 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 MANEAQ5SRI9 462 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF783Q6ZMS7 281 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 CMTM4Q8IZR5 234 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 CPXM2Q8N436 756 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 WBP2Q969T9 261 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 TMEM159Q96B96 161 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 HMX1Q9NP08 348 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 GSN-AS1Q9NRJ2 163 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 MED9Q9NWA0 146 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 IL20Q9NYY1 176 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 ASF1AQ9Y294 204 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 ARID1BQ8NFD5 2236 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 A0A1W2PRQ8 180 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 MEIS3P1A6NDR6 274 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 H0YIV9 168 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 GALR3O60755 368 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 MST1P26927 711 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 H2BFSP57053 126 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 C4orf46Q504U0 113 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 CAMKMTQ7Z624 323 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 NRMQ8IXM6 262 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 SMIM4Q8WVI0 70 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF75AQ96N20 296 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 NDC1Q9BTX1 674 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 NPDC1Q9NQX5 325 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 SPHK1Q9NYA1 384 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 MARK1Q9P0L2 795 aa12.18□□□□□ -0.46
GAPVD1-220ENST00000497580 PTPRDP23468 1912 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 KDM4EB2RXH2 506 aaPredicted RBP12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 HMGN4O00479 90 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 PSMA3P25788 255 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 HACD4Q5VWC8 232 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 C1orf94Q6P1W5 598 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 CYB561A3Q8NBI2 242 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 GOT1L1Q8NHS2 421 aaPredicted RBP12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 GHSRQ92847 366 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 PLEKHM1Q9Y4G2 1056 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 PYCARD-AS1I3L0S3 204 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 FGF18O76093 207 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 STATHP02808 62 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 GRB14Q14449 540 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 SEZ6L2Q6UXD5 910 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 OR14A16Q8NHC5 309 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 PIGXQ8TBF5 258 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 PEX11GQ96HA9 241 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 SYNDIG1Q9H7V2 258 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 TREM1Q9NP99 234 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 OPN4Q9UHM6 478 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 DYRK1BQ9Y463 629 aa12.17□□□□□ -0.46
GAPVD1-220ENST00000497580 A0A0G2JK05 382 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 GLOD5A6NK44 160 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 MPTX1A8MV57 137 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 KRT33AO76009 404 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 CATP04040 527 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 HCCSP53701 268 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 RAG2P55895 527 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 DLX5P56178 289 aa12.16□□□□□ -0.46
GAPVD1-220ENST00000497580 TP53I3Q53FA7 332 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms