RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 LRRC52Q8N7C0 313 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 LEMD2Q8NC56 503 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 OR9Q2Q8NGE9 314 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 OR5B17Q8NGF7 314 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 RPLP0P6Q8NHW5 317 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ZNF420Q8TAQ5 688 aaPredicted RBP3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ADAMTS16Q8TE57 1224 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 SSC4DQ8WTU2 575 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 TFB1MQ8WVM0 346 aaKnown RBP3.23□□□□□ -1.89
TRIM4-205ENST00000496896 HTR3CQ8WXA8 447 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 RXFP2Q8WXD0 754 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 NXPE2Q96DL1 559 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ASB9Q96DX5 294 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 CFAP36Q96G28 342 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 DCUN1D1Q96GG9 259 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ZNF414Q96IQ9 312 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 HSFY1Q96LI6 401 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 SPATA13Q96N96 652 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 CPXM1Q96SM3 734 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 CYP2S1Q96SQ9 504 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 RBBP8Q99708 897 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 HNRNPABQ99729 332 aaKnown RBP3.23□□□□□ -1.89
TRIM4-205ENST00000496896 TCHPQ9BT92 498 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 TRIM62Q9BVG3 475 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 IL22Q9GZX6 179 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ILKAPQ9H0C8 392 aaPredicted RBP3.23□□□□□ -1.89
TRIM4-205ENST00000496896 RPAP3Q9H6T3 665 aaPredicted RBP3.23□□□□□ -1.89
TRIM4-205ENST00000496896 RPF1Q9H9Y2 349 aaKnown RBP3.23□□□□□ -1.89
TRIM4-205ENST00000496896 PNPLA3Q9NST1 481 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 GIN1Q9NXP7 522 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ZNF581Q9P0T4 197 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 TMEM9Q9P0T7 183 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ARMCX1Q9P291 453 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 ZNF107Q9UII5 783 aaPredicted RBP3.23□□□□□ -1.89
TRIM4-205ENST00000496896 AP4S1Q9Y587 144 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 RLFQ13129 1914 aa3.23□□□□□ -1.89
TRIM4-205ENST00000496896 A0A087WXM4 84 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 TRIM64CA6NLI5 447 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 TCP10L2B9ZVM9 353 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 M0QYV0 167 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 UBE2CO00762 179 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 KLHL41O60662 606 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 PFDN1O60925 122 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 HSPA4LO95757 839 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 AP2A1O95782 977 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 RPLP0P05388 317 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 MELTFP08582 738 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 MMP10P09238 476 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 FAM200BP0CF97 657 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ZCCHC18P0CG32 403 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ERCC2P18074 760 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CYP2F1P24903 491 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 LMO2P25791 158 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 EEF1DP29692 281 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 SLC26A3P40879 764 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CDX1P47902 265 aaPredicted RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 RGS7P49802 495 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 RPL14P50914 215 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 AQP4P55087 323 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 HPCAP84074 193 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 TFAMQ00059 246 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 LAMTOR4Q0VGL1 99 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ART3Q13508 389 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 GRB14Q14449 540 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 PAFAH1B3Q15102 231 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 C3AR1Q16581 482 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 SHROOM1Q2M3G4 852 aaPredicted RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 DCAF4L1Q3SXM0 396 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 RNLSQ5VYX0 342 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 TXNRD3NBQ6F5E7 133 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 SNRNP48Q6IEG0 339 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 FAM45BPQ6NSW5 357 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 VITQ6UXI7 678 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ZYG11AQ6WRX3 759 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CYP4V2Q6ZWL3 525 aaPredicted RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 RAPH1Q70E73 1250 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 TMUB2Q71RG4 321 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 TMEM135Q86UB9 458 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 KCNMB4Q86W47 210 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ERO1BQ86YB8 467 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 LRRC49Q8IUZ0 686 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 SLC22A9Q8IVM8 553 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CNTN4Q8IWV2 1026 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 DEFB107AQ8IZN7 70 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CHCHD4Q8N4Q1 142 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CCDC185Q8N715 623 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 PQLC3Q8N755 202 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CAMKVQ8NCB2 501 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 JOSD2Q8TAC2 188 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 FAM45AQ8TCE6 357 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 PYDC1Q8WXC3 89 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 NTAN1Q96AB6 310 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ROPN1LQ96C74 230 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CERS2Q96G23 380 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ZNF558Q96NG5 402 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 KLF6Q99612 283 aaPredicted RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 GPR22Q99680 433 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 BCL7BQ9BQE9 202 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 SNRNP25Q9BV90 132 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms