RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 FLRT3Q9NZU0 649 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 TNFRSF10DQ9UBN6 386 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 DTX4Q9Y2E6 619 aa12.06□□□□□ -0.48
GARNL3-220ENST00000496711 YARS2Q9Y2Z4 477 aaKnown RBP12.06□□□□□ -0.48
GARNL3-220ENST00000496711 PCDH15Q96QU1 1955 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 A0A1B0GWA3 101 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 FAM86C2PA6NEL3 165 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 PLD2O14939 933 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 AKAP8O43823 692 aaKnown RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 SNX4O95219 450 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 PTTG1O95997 202 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 PAICSP22234 425 aaKnown RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ATP6V1E1P36543 226 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 RBM34P42696 430 aaKnown RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 GPR3P46089 330 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 SEPHS1P49903 392 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 PSMD4P55036 377 aaKnown RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 GFERP55789 205 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 RACK1P63244 317 aaKnown RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 MXD1Q05195 221 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ACSM1Q08AH1 577 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 FGFBP1Q14512 234 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 UBXN2BQ14CS0 331 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF141Q15928 474 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ZSWIM7Q19AV6 140 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF791Q3KP31 576 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 TCTE1Q5JU00 501 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ARMC4Q5T2S8 1044 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 C17orf82Q86X59 251 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 POC5Q8NA72 575 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 OTULINQ96BN8 352 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ARSGQ96EG1 525 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 C1GALT1C1Q96EU7 318 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 MMABQ96EY8 250 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF578Q96N58 590 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 PTCHD1Q96NR3 888 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 TGM7Q96PF1 710 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 SECISBP2Q96T21 854 aaKnown RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 NEURL2Q9BR09 285 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 MED18Q9BUE0 208 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 G6PC3Q9BUM1 346 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF426Q9BUY5 554 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 CCDC32Q9BV29 185 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 IFT27Q9BW83 186 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 MEPEQ9NQ76 525 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-220ENST00000496711 SIGLEC7Q9Y286 467 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 CLDN16Q9Y5I7 305 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 GON4LQ3T8J9 2241 aa12.05□□□□□ -0.48
GARNL3-220ENST00000496711 RGS5O15539 181 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 AQP9O43315 295 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 HCN1O60741 890 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 MAOAP21397 527 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 MAOBP27338 520 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 TNFSF8P32971 234 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ACAA2P42765 397 aaKnown RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 FNTBP49356 437 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 HSD17B7P56937 341 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 PSPHP78330 225 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 BTG2P78543 158 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 HNRNPA0Q13151 305 aaKnown RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ERV3-1Q14264 604 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CRTC2Q53ET0 693 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CD200R1LQ6Q8B3 271 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF550Q7Z398 422 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 METTL27Q8N6F8 245 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 LSMEM1Q8N8F7 131 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CADM4Q8NFZ8 388 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 OR51G2Q8NGK0 314 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 SPACA7Q96KW9 195 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 WDFY2Q96P53 400 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF649Q9BS31 505 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 PDE7BQ9NP56 450 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CMC2Q9NRP2 79 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ERVK-19Q9WJR5 959 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 GSTK1Q9Y2Q3 226 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 EML5Q05BV3 1969 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 EYSQ5T1H1 3165 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 TRAV27A0A087WT01 109 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 IGHV5-51A0A0C4DH38 117 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 NPIPB9F8W1W9 429 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 J3QRE1 110 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ADAM11O75078 769 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 RFPL3O75679 317 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 LALBAP00709 142 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 MSL3P1P0C860 447 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 FGF9P31371 208 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 SLC9A3P48764 834 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 PGDP52209 483 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 FUT7Q11130 342 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 DEFB133Q30KQ1 61 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 TBC1D25Q3MII6 688 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ALG10BQ5I7T1 473 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 PRPF38BQ5VTL8 546 aaKnown RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 THSD4Q6ZMP0 1018 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 MEPCEQ7L2J0 689 aaKnown RBP12.04□□□□□ -0.48
GARNL3-220ENST00000496711 CMIPQ8IY22 773 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 ZFP41Q8N8Y5 198 aa12.04□□□□□ -0.48
GARNL3-220ENST00000496711 RCBTB1Q8NDN9 531 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms