RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CTPS2Q9NRF8 586 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 CA10Q9NS85 328 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 EXOGQ9Y2C4 368 aaKnown RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 HS3ST4Q9Y661 456 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 SCN8AQ9UQD0 1980 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 C2orf92A0A1B0GVN3 265 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 GSAPA4D1B5 854 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 HIDE1A8MVS5 230 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 GFYI3L273 518 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 LRRTM2O43300 516 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 RNF13O43567 381 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 SOX14O95416 240 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 TRBC1P01850 177 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 IGHA1P01876 353 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 H1F0P07305 194 aaKnown RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 ALPIP09923 528 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 ARAFP10398 606 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 LAMP1P11279 417 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 MC4RP32245 332 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 RIDAP52758 137 aaKnown RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 HCCSP53701 268 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 YBEYP58557 167 aaPredicted RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 RAB8AP61006 207 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 SERINC3Q13530 473 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 IL10RAQ13651 578 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 GINS1Q14691 196 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 UAP1L1Q3KQV9 507 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 OR2B11Q5JQS5 317 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 OLFML2AQ68BL7 652 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 BCDIN3DQ7Z5W3 292 aaKnown RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 LHFPL3Q86UP9 236 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 NR2C2APQ86WQ0 139 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 CBLN2Q8IUK8 224 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 PIANPQ8IYJ0 282 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 C2CD4CQ8TF44 421 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 POM121Q96HA1 1249 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 GUCD1Q96NT3 240 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 CDX2Q99626 313 aaPredicted RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 MFFQ9GZY8 342 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 CHRDQ9H2X0 955 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 TMPRSS5Q9H3S3 457 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 HRASLSQ9HDD0 168 aa8.47□□□□□ -1.05
HPS4-217ENST00000496385 RPH3AQ9Y2J0 694 aaPredicted RBP8.47□□□□□ -1.05
HPS4-217ENST00000496385 BPTFQ12830 3046 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 CD8B2A6NJW9 211 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 H3BNC9 293 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 MAN2B1O00754 1011 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 PPM1DO15297 605 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 KHDRBS3O75525 346 aaKnown RBP8.46□□□□□ -1.05
HPS4-217ENST00000496385 ASGR2P07307 311 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 CD8BP10966 210 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 HSD3B1P14060 373 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 FPR3P25089 353 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 HSD3B2P26439 372 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 VIPR1P32241 457 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 GDNFP39905 211 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 GDF5P43026 501 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 SPCS3P61009 180 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 HABP2Q14520 560 aaPredicted RBP8.46□□□□□ -1.05
HPS4-217ENST00000496385 KCNAB1Q14722 419 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 CDC73Q6P1J9 531 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 WDR53Q7Z5U6 358 aaPredicted RBP8.46□□□□□ -1.05
HPS4-217ENST00000496385 OR51Q1Q8NH59 317 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 NFKBIDQ8NI38 313 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 APOBEC4Q8WW27 367 aaKnown RBP8.46□□□□□ -1.05
HPS4-217ENST00000496385 PSMG2Q969U7 264 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 PFDN5Q99471 154 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.05
HPS4-217ENST00000496385 IGFLR1Q9H665 355 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 NOX3Q9HBY0 568 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 NKIRAS2Q9NYR9 191 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 ZNF69Q9UC07 566 aa8.46□□□□□ -1.05
HPS4-217ENST00000496385 OR14I1A6ND48 311 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 F5H5P2 479 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 FFAR1O14842 300 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 YY2O15391 372 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 ABOP16442 354 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 ZNF7P17097 686 aaPredicted RBP8.46□□□□□ -1.06
HPS4-217ENST00000496385 RPL3P39023 403 aaKnown RBP8.46□□□□□ -1.06
HPS4-217ENST00000496385 MAPK9P45984 424 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 GCGRP47871 477 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 CCR8P51685 355 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 MRPS10P82664 201 aaKnown RBP8.46□□□□□ -1.06
HPS4-217ENST00000496385 CACNG1Q06432 222 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 BCL2L1Q07817 233 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 SLC3A1Q07837 685 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 GAB1Q13480 694 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 ZNF235Q14590 738 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 PEA15Q15121 130 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 MAPK14Q16539 360 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 ENTPD8Q5MY95 495 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 FRG2Q64ET8 278 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 SMARCD3Q6STE5 483 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 RBMS3Q6XE24 437 aaKnown RBP8.46□□□□□ -1.06
HPS4-217ENST00000496385 ZNF783Q6ZMS7 281 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 SLC43A2Q8N370 569 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 RNASE11Q8TAA1 199 aaKnown RBP8.46□□□□□ -1.06
HPS4-217ENST00000496385 FRG2BQ96QU4 278 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 BRWD1Q9NSI6 2320 aa8.46□□□□□ -1.06
HPS4-217ENST00000496385 FXYD6-FXYD2A0A087WZ82 144 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms