RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	VIM	P08670	466 aa	Known RBP	14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	ETFA	P13804	333 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	CHRNB4	P30926	498 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	CEACAM8	P31997	349 aa	Predicted RBP	14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	ART1	P52961	327 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	CLDN20	P56880	219 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	TOMM34	Q15785	309 aa	Predicted RBP	14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	PLPPR5	Q32ZL2	321 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	RIPPLY2	Q5TAB7	128 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	AP1AR	Q63HQ0	302 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	ADGRE4P	Q86SQ3	457 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	LACC1	Q8IV20	430 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	UBQLNL	Q8IYU4	475 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	ZNF619	Q8N2I2	560 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	POC1B	Q8TC44	478 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	ASB5	Q8WWX0	329 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	ARSG	Q96EG1	525 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	C14orf79	Q96F83	325 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	PIGQ	Q9BRB3	760 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	QRSL1	Q9H0R6	528 aa	Known RBP	14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	SLC38A1	Q9H2H9	487 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	CCDC134	Q9H6E4	229 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	SLC25A37	Q9NYZ2	338 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325	ICAM5	Q9UMF0	924 aa		14.29	□□□□□ -0.12
PRKCZ-222	ENST00000496325		A0A096LPI6	279 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	CD8B2	A6NJW9	211 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	CLCA1	A8K7I4	914 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325		H3BNH8	94 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	BCAS1	O75363	584 aa	Predicted RBP	14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	GUSB	P08236	651 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	LINGO3	P0C6S8	592 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	PEPD	P12955	493 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	PSMA4	P25789	261 aa	Known RBP	14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	MDH1	P40925	334 aa	Known RBP	14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	P2RX1	P51575	399 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	BCL2A1	Q16548	175 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	FREM1	Q5H8C1	2179 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	LRIF1	Q5T3J3	769 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	MSRB3	Q8IXL7	192 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	C9orf106	Q8NAJ2	232 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	SMPDL3B	Q92485	455 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	SIKE1	Q9BRV8	207 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	GSX1	Q9H4S2	264 aa	Predicted RBP	14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	CALHM2	Q9HA72	323 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	MCCC2	Q9HCC0	563 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	HHATL	Q9HCP6	504 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	POLE3	Q9NRF9	147 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325	L3MBTL1	Q9Y468	752 aa		14.28	□□□□□ -0.12
PRKCZ-222	ENST00000496325		A0A087WZY1	265 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	MBD3L4	A6NDZ8	208 aa	Predicted RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	MBD3L3	A6NE82	208 aa	Predicted RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	MBD3L5	A6NJ08	208 aa	Predicted RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	CLIC1	O00299	241 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	ZNF264	O43296	627 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	SEC14L5	O43304	696 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	NUDT14	O95848	222 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	OPN1LW	P04000	364 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	TROVE2	P10155	538 aa	Known RBP eCLIP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	UBL4A	P11441	157 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	CD99	P14209	185 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	IL11	P20809	199 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	TIMP3	P35625	211 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	CRAT	P43155	626 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	ZNF41	P51814	821 aa	Predicted RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	ZNF136	P52737	540 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	DSTN	P60981	165 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	IRX1	P78414	480 aa	Predicted RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	TXNL4A	P83876	142 aa	Known RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	PLAUR	Q03405	335 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	FGFBP1	Q14512	234 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	SF3B4	Q15427	424 aa	Known RBP eCLIP	14.27	□□□□□ -0.13	3e-6	■■■■□ 20.6
PRKCZ-222	ENST00000496325	POMZP3	Q6PJE2	187 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	LRRC74B	Q6ZQY2	392 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	GPR119	Q8TDV5	335 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	RNF145	Q96MT1	663 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	TRNT1	Q96Q11	434 aa	Known RBP	14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	TMEM45A	Q9NWC5	275 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	CLCF1	Q9UBD9	225 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325	LIPT1	Q9Y234	373 aa		14.27	□□□□□ -0.13
PRKCZ-222	ENST00000496325		A0A1W2PP18	115 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	CLDN24	A6NM45	220 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	LINC01387	J3KSC0	135 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	EFNA2	O43921	213 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	EIF4E2	O60573	245 aa	Known RBP	14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	CYP7B1	O75881	506 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	CSTA	P01040	98 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	IL2RA	P01589	272 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	NUDT7	P0C024	238 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	UBTFL6	P0CB48	400 aa	Predicted RBP	14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	NR2F1	P10589	423 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	PGM1	P36871	562 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	ANXA11	P50995	505 aa	Known RBP	14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	AGFG1	P52594	562 aa	Known RBP	14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	ARFIP2	P53365	341 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	TFF3	Q07654	80 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	FOXF1	Q12946	379 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	SKP2	Q13309	424 aa		14.26	□□□□□ -0.13
PRKCZ-222	ENST00000496325	RGN	Q15493	299 aa		14.26	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms