RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 LBPP18428 481 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 KLK2P20151 261 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 BGNP21810 368 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 UQCRC2P22695 453 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 CRYGSP22914 178 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 MPP2Q14168 576 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 EXOC3L2Q2M3D2 409 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 ARHGAP11BQ3KRB8 267 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 TMEM176BQ3YBM2 270 aaPredicted RBP11.41□□□□□ -0.58
PTPRF-214ENST00000496043 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTPRF-214ENST00000496043 HHATQ5VTY9 493 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 CBLN3Q6UW01 205 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 STK32CQ86UX6 486 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 LRRC34Q8IZ02 419 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 CLECL1Q8IZS7 167 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 ZNF614Q8N883 585 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 TOR1AIP2Q8NFQ8 470 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 OR5D16Q8NGK9 328 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 OR4A15Q8NGL6 344 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 ARL8AQ96BM9 186 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 KLHL15Q96M94 604 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 SORT1Q99523 831 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 KLHDC3Q9BQ90 382 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 NMUR2Q9GZQ4 415 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 EXD2Q9NVH0 621 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 C6orf203Q9P0P8 240 aaPredicted RBP11.41□□□□□ -0.58
PTPRF-214ENST00000496043 HAO1Q9UJM8 370 aa11.41□□□□□ -0.58
PTPRF-214ENST00000496043 ABCA4P78363 2273 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 SERINC4A6NH21 518 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ZNF264O43296 627 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 OIP5O43482 229 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 AGR2O95994 175 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 PPP3CBP16298 524 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ELK4P28324 431 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 SFTPDP35247 375 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
PTPRF-214ENST00000496043 CLNS1AP54105 237 aaKnown RBP11.4□□□□□ -0.58
PTPRF-214ENST00000496043 FOXF1Q12946 379 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 GPR68Q15743 365 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 TOMM34Q15785 309 aaPredicted RBP11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ZNF141Q15928 474 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ATAD3BQ5T9A4 648 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ANKRD34AQ69YU3 496 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 BEND4Q6ZU67 534 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 CLEC4FQ8N1N0 589 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ATP6V1C2Q8NEY4 427 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 OR5W2Q8NH69 310 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 RFWD2Q8NHY2 731 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 MIPOL1Q8TD10 442 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 XAGE5Q8WWM1 108 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ROBO4Q8WZ75 1007 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 CPNE4Q96A23 557 aaPredicted RBP11.4□□□□□ -0.58
PTPRF-214ENST00000496043 TESCQ96BS2 214 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ARSGQ96EG1 525 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 PIK3IP1Q96FE7 263 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 ZC3HAV1LQ96H79 300 aaKnown RBP11.4□□□□□ -0.58
PTPRF-214ENST00000496043 SLC35G5Q96KT7 338 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 MRGPRX4Q96LA9 322 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 NUF2Q9BZD4 464 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 LAT2Q9GZY6 243 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 PNPOQ9NVS9 261 aa11.4□□□□□ -0.58
PTPRF-214ENST00000496043 BEX4Q9NWD9 120 aaPredicted RBP11.4□□□□□ -0.58
PTPRF-214ENST00000496043 NUP214P35658 2090 aaPredicted RBP11.4□□□□□ -0.58
PTPRF-214ENST00000496043 RNF103-CHMP3A0A140T963 221 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 DEFB108AA8MXU0 73 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 FCMRO60667 390 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 SCN2BO60939 215 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 PRKD3O94806 890 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 OR12D1P0DN82 309 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 UBL4AP11441 157 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 PRKCAP17252 672 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 CD53P19397 219 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 S100A3P33764 101 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 RPS26P62854 115 aaKnown RBP11.39□□□□□ -0.59
PTPRF-214ENST00000496043 ADAM8P78325 824 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 PHC1P78364 1004 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 CBFBQ13951 182 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 CASP8Q14790 479 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 RNPS1Q15287 305 aaKnown RBP11.39□□□□□ -0.59
PTPRF-214ENST00000496043 DPY19L1Q2PZI1 675 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 SLC25A53Q5H9E4 307 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 TMEM201Q5SNT2 666 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 PDZK1Q5T2W1 519 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 ZNF550Q7Z398 422 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 C16orf62Q7Z3J2 963 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 ANKRD42Q8N9B4 389 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 ZBTB9Q96C00 473 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 THUMPD3Q9BV44 507 aaKnown RBP11.39□□□□□ -0.59
PTPRF-214ENST00000496043 OR51I1Q9H343 314 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 SERHL2Q9H4I8 314 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 MEAF6Q9HAF1 191 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 MKLN1Q9UL63 735 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 GPR52Q9Y2T5 361 aa11.39□□□□□ -0.59
PTPRF-214ENST00000496043 ANKRD28O15084 1053 aa11.38□□□□□ -0.59
PTPRF-214ENST00000496043 CYP7B1O75881 506 aa11.38□□□□□ -0.59
PTPRF-214ENST00000496043 CSTAP01040 98 aa11.38□□□□□ -0.59
PTPRF-214ENST00000496043 GUSBP08236 651 aa11.38□□□□□ -0.59
PTPRF-214ENST00000496043 FOSL1P15407 271 aa11.38□□□□□ -0.59
PTPRF-214ENST00000496043 FPR1P21462 350 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms