RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ATG4DQ86TL0 474 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 MISPQ8IVT2 679 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 LILRA2Q8N149 483 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 CIARTQ8N365 385 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 FBXO27Q8NI29 283 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 ADAMTS15Q8TE58 950 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 RNF128Q8TEB7 428 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 IGFBPL1Q8WX77 278 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 TUBGCP3Q96CW5 907 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 SORT1Q99523 831 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 DUSP26Q9BV47 211 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 PRRG4Q9BZD6 226 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 ROPN1BQ9BZX4 212 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 BHLHE41Q9C0J9 482 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 C12orf49Q9H741 205 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 ROPN1Q9HAT0 212 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 PLSCR4Q9NRQ2 329 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 BEX4Q9NWD9 120 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 ZNF226Q9NYT6 803 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 ING1Q9UK53 422 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 MCTS1Q9ULC4 181 aaKnown RBP10.39□□□□□ -0.75
VTI1A-208ENST00000494728 EMC9Q9Y3B6 208 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
VTI1A-208ENST00000494728 SVEP1Q4LDE5 3571 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 IGHV3-15A0A0B4J1V0 119 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 ANKRD28O15084 1053 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 SCN2BO60939 215 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 GCM2O75603 506 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-208ENST00000494728 H6PDO95479 791 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 PLGP00747 810 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-208ENST00000494728 HPGDP15428 266 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 ELK4P28324 431 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 RPL3P39023 403 aaKnown RBP10.38□□□□□ -0.75
VTI1A-208ENST00000494728 P2RX1P51575 399 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 CLDN8P56748 225 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 NKX6-1P78426 367 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-208ENST00000494728 SKP2Q13309 424 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 FGFBP1Q14512 234 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 TSC22D1Q15714 1073 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 CHI3L2Q15782 390 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 PDZK1Q5T2W1 519 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 WDR93Q6P2C0 686 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 EMBQ6PCB8 327 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 NUFIP2Q7Z417 695 aaKnown RBP10.38□□□□□ -0.75
VTI1A-208ENST00000494728 HMGN2P46Q86SG4 172 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 ANKRD46Q86W74 232 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 MREGQ8N565 214 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 ZNF614Q8N883 585 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 RFWD2Q8NHY2 731 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 GPR119Q8TDV5 335 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 OSTF1Q92882 214 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 SDF2Q99470 211 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 SLC39A3Q9BRY0 314 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 TMEM109Q9BVC6 243 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 AKTIPQ9H8T0 292 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 ASIC5Q9NY37 505 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 COL6A5A8TX70 2615 aa10.38□□□□□ -0.75
VTI1A-208ENST00000494728 RNF103-CHMP3A0A140T963 221 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 A0A1W2PNR3 127 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 CFLARO15519 480 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 FCMRO60667 390 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 SYNGR4O95473 234 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 HSPA4LO95757 839 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 NUDT14O95848 222 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 DHRS4L1P0CG22 281 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 FOSL1P15407 271 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 PRPS1L1P21108 318 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ATP6V1C1P21283 382 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ME2P23368 584 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ATP12AP54707 1039 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 CTBP2P56545 445 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 EMX2Q04743 252 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 MAPK14Q16539 360 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ACKR1Q16570 336 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 PGS1Q32NB8 556 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 KRTAP21-3Q3LHN1 58 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 KRT71Q3SY84 523 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 SEZ6L2Q6UXD5 910 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 TFAP2EQ6VUC0 442 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 MTERF4Q7Z6M4 381 aaKnown RBP10.37□□□□□ -0.75
VTI1A-208ENST00000494728 NUDCD3Q8IVD9 361 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 TMCO5AQ8N6Q1 288 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ATP6V1C2Q8NEY4 427 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ZFP90Q8TF47 636 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 PERPQ96FX8 193 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 C18orf12Q96KH6 178 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 SLC35G5Q96KT7 338 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 CCL19Q99731 98 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ACTR6Q9GZN1 396 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 QRSL1Q9H0R6 528 aaKnown RBP10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ATAD3AQ9NVI7 634 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 KLHL13Q9P2N7 655 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 FAF1Q9UNN5 650 aaPredicted RBP10.37□□□□□ -0.75
VTI1A-208ENST00000494728 DTNAQ9Y4J8 743 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 ACTL7BQ9Y614 415 aa10.37□□□□□ -0.75
VTI1A-208ENST00000494728 PRAMEF27A3QJZ7 478 aa10.36□□□□□ -0.75
VTI1A-208ENST00000494728 TRIM64A6NGJ6 449 aa10.36□□□□□ -0.75
VTI1A-208ENST00000494728 TRIM64BA6NI03 449 aa10.36□□□□□ -0.75
VTI1A-208ENST00000494728 C9JVG2 144 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms