RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 RPN2P04844 631 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 IFNA6P05013 189 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 KRT16P08779 473 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CD3GP09693 182 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 HSMCR30P0CW71 290 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CT45A8P0DMV1 189 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CT45A9P0DMV2 189 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SMIM10L1P0DMW3 83 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CALM1P0DP23 149 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CALM2P0DP24 149 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CALM3P0DP25 149 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ETS2P15036 469 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MAGP20916 626 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PRPS1L1P21108 318 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SYT1P21579 422 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CHATP28329 748 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GTF2E2P29084 291 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 HNRNPH3P31942 346 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 STX2P32856 288 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CDH5P33151 784 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MMP12P39900 470 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MAGEA2P43356 314 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 UQCRFS1P47985 274 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NPBWR2P48146 333 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NR0B1P51843 470 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PLK1P53350 603 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACLYP53396 1101 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PSMD4P55036 377 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GEMP55040 296 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 UCNP55089 124 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 AP3S2P59780 193 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PLP1P60201 277 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACTBP60709 375 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACTA2P62736 377 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 VSNL1P62760 191 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PPIAP62937 165 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACTG1P63261 375 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACTG2P63267 376 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACTC1P68032 377 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FKBP1BP68106 108 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACTA1P68133 377 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ADARB1P78563 741 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PITPNAQ00169 270 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 IL9RQ01113 521 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CDR2Q01850 454 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 RAD51Q06609 339 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CYP24A1Q07973 514 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SIGLEC14Q08ET2 396 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SMARCB1Q12824 385 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TSPAN31Q12999 210 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GRIK2Q13002 908 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NFATC2Q13469 925 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PEX6Q13608 980 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 VEZF1Q14119 521 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SLC17A1Q14916 467 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FASTKD3Q14CZ7 662 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 C2orf68Q2NKX9 166 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TMEM30BQ3MIR4 351 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF528Q3MIS6 628 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GLYR1Q49A26 553 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PTPN20Q4JDL3 420 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ESCO2Q56NI9 601 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SFT2D3Q587I9 215 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CT45A2Q5DJT8 189 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GPR107Q5VW38 600 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 KHDRBS2Q5VWX1 349 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GGNBP1Q5YKI7 109 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ALS2CLQ60I27 953 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NSUN5P2Q63ZY6 315 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FAM109BQ6ICB4 259 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SLC8B1Q6J4K2 584 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 C11orf63Q6NUN7 778 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 RGMBQ6NW40 437 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ULK3Q6PHR2 472 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 VITQ6UXI7 678 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 HSDL2Q6YN16 418 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TMPRSS11FQ6ZWK6 438 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ANKRD33Q7Z3H0 272 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GOLGA7Q7Z5G4 137 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TMPRSS11BQ86T26 416 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PARGQ86W56 976 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SERPINA9Q86WD7 417 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MMAAQ8IVH4 418 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MB21D2Q8IYB1 491 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MCOLN2Q8IZK6 566 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CMTM8Q8IZV2 173 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 LYG1Q8N1E2 194 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CLEC4FQ8N1N0 589 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ARHGAP18Q8N392 663 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF786Q8N393 782 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TBC1D19Q8N5T2 526 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 C8orf31Q8N9H6 132 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CHDHQ8NE62 594 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 DDHD1Q8NEL9 900 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 OR2L3Q8NG85 312 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 OR13C3Q8NGS6 347 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SAP25Q8TEE9 199 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SSMEM1Q8WWF3 244 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FCAMRQ8WWV6 532 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SMPDL3BQ92485 455 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms