RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PINK1Q9BXM7 581 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 L3MBTL1Q9Y468 752 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 CENPVL1A0A0U1RR11 272 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 PRAMEF27A3QJZ7 478 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 KRT75O95678 551 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 GSNP06396 782 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 ZCCHC18P0CG32 403 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 ADH6P28332 368 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 AGFG1P52594 562 aaKnown RBP20.36■□□□□ 0.85
SNIP1-203ENST00000493916 AQP5P55064 265 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 STX1BP61266 288 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 FOXF1Q12946 379 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 NDUFAF6Q330K2 333 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 OLIG3Q7RTU3 272 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 GCNT2Q8N0V5 402 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 OR5W2Q8NH69 310 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 GPR119Q8TDV5 335 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 ZFP90Q8TF47 636 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 ITCHQ96J02 903 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 TRNT1Q96Q11 434 aaKnown RBP20.36■□□□□ 0.85
SNIP1-203ENST00000493916 SLC6A13Q9NSD5 602 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 LIPT1Q9Y234 373 aa20.36■□□□□ 0.85
SNIP1-203ENST00000493916 GPC6Q9Y625 555 aaPredicted RBP20.36■□□□□ 0.85
SNIP1-203ENST00000493916 A0A1W2PNV4 684 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 EEF1E1-BLOC1S5C9J1V9 151 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 ETV2O00321 342 aaPredicted RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 EEF1E1O43324 174 aaKnown RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 DNAJA2O60884 412 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 NUDT14O95848 222 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 ME2P23368 584 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 UQCRC1P31930 480 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 IRX1P78414 480 aaPredicted RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 HPCAP84074 193 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 SKP2Q13309 424 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 CBFBQ13951 182 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 PON3Q15166 354 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 MAPK14Q16539 360 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 CTU2Q2VPK5 515 aaKnown RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 DNAJC14Q6Y2X3 702 aaPredicted RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 EIF3MQ7L2H7 374 aaKnown RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 ZNF619Q8N2I2 560 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 FIG4Q92562 907 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 ZNF845Q96IR2 970 aaPredicted RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 LAT2Q9GZY6 243 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 PIGMQ9H3S5 423 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 RNF122Q9H9V4 155 aa20.35■□□□□ 0.85
SNIP1-203ENST00000493916 PAQR5Q9NXK6 330 aaPredicted RBP20.35■□□□□ 0.85
SNIP1-203ENST00000493916 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 EIF1AYO14602 144 aaKnown RBP20.34■□□□□ 0.85
SNIP1-203ENST00000493916 ADAMDEC1O15204 470 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 TNFSF13O75888 250 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 H6PDO95479 791 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 NTN1O95631 604 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 FCGR2AP12318 317 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 TLE4Q04727 773 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 FGFBP1Q14512 234 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 GPAT3Q53EU6 434 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 SLC25A53Q5H9E4 307 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 COX20Q5RI15 118 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 ESPNLQ6ZVH7 1005 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 TMCO5AQ8N6Q1 288 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 FAM71CQ8NEG0 241 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 FNDC9Q8TBE3 224 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 VPS33AQ96AX1 596 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 MRGPRX4Q96LA9 322 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 MCCC2Q9HCC0 563 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 SLC35A3Q9Y2D2 325 aa20.34■□□□□ 0.85
SNIP1-203ENST00000493916 CSMD1Q96PZ7 3565 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 CSTAP01040 98 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 PRKCAP17252 672 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 EIF1AXP47813 144 aaKnown RBP20.33■□□□□ 0.85
SNIP1-203ENST00000493916 ATP4BP51164 291 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 MVDP53602 400 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 TOMM34Q15785 309 aaPredicted RBP20.33■□□□□ 0.85
SNIP1-203ENST00000493916 SYPL1Q16563 259 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 ANKFN1Q8N957 763 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 OR10D3Q8NH80 312 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 OR2V1Q8NHB1 315 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 FBXO27Q8NI29 283 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 PNPT1Q8TCS8 783 aaKnown RBP20.33■□□□□ 0.85
SNIP1-203ENST00000493916 LURAP1Q96LR2 239 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 TMEM45AQ9NWC5 275 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 ZNF446Q9NWS9 450 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 PACSIN3Q9UKS6 424 aa20.33■□□□□ 0.85
SNIP1-203ENST00000493916 INTS1Q8N201 2190 aaKnown RBP20.33■□□□□ 0.85
SNIP1-203ENST00000493916 PDZD2O15018 2839 aa20.33■□□□□ 0.84
SNIP1-203ENST00000493916 ANP32DO95626 131 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 CHRM4P08173 479 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 IL11P20809 199 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 PGM1P36871 562 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 SORDQ00796 357 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 CHRNEQ04844 493 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 QPRTQ15274 297 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 SGCBQ16585 318 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 LRRC74BQ6ZQY2 392 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 LILRA2Q8N149 483 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 RFWD2Q8NHY2 731 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 GTF2H4Q92759 462 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 PMM1Q92871 262 aa20.32■□□□□ 0.84
SNIP1-203ENST00000493916 KLHL15Q96M94 604 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms