RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 LAT2Q9GZY6 243 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 DSN1Q9H410 356 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 IL1RAPQ9NPH3 570 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 SDHAF3Q9NRP4 125 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 NDUFAF4Q9P032 175 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 FBXL2Q9UKC9 423 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 TP53TG5Q9Y2B4 290 aa17.67■□□□□ 0.42
USP39-218ENST00000493829 NME2P1O60361 137 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 SEMA7AO75326 666 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 ITGB2P05107 769 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 NME2P22392 152 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 EPS8Q12929 822 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 SLC25A25Q6KCM7 469 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 TMEM81Q6P7N7 255 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 PLEKHM3Q6ZWE6 761 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 ZNF550Q7Z398 422 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 ZADH2Q8N4Q0 377 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 WDSUB1Q8N9V3 476 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 OR4K17Q8NGC6 315 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 TM9SF4Q92544 642 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 ZNF597Q96LX8 424 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 MFRPQ9BY79 579 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 TUBA8Q9NY65 449 aaPredicted RBP17.66■□□□□ 0.42
USP39-218ENST00000493829 ICAM5Q9UMF0 924 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 ENPP4Q9Y6X5 453 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 ZZEF1O43149 2961 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 NINQ8N4C6 2090 aa17.66■□□□□ 0.42
USP39-218ENST00000493829 EIF4E2O60573 245 aaKnown RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 BAG2O95816 211 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 CNR1P21554 472 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 ACAA2P42765 397 aaKnown RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 P2RX1P51575 399 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 ZSWIM7Q19AV6 140 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 ENTPD8Q5MY95 495 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 ZFP1Q6P2D0 407 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 SULF2Q8IWU5 870 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 TOR1AIP2Q8NFQ8 470 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 OR2M7Q8NG81 312 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 ZNF563Q8TA94 476 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 RNF217Q8TC41 542 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 LRTOMTQ8WZ04 291 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 POP5Q969H6 163 aaKnown RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 DUS3LQ96G46 650 aaKnown RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 GNRHR2Q96P88 292 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 ZNF300Q96RE9 604 aaPredicted RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 EXOSC3Q9NQT5 275 aaKnown RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 TESQ9UGI8 421 aaKnown RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 KLF13Q9Y2Y9 288 aaPredicted RBP17.65■□□□□ 0.42
USP39-218ENST00000493829 TESMINQ9Y4I5 508 aa17.65■□□□□ 0.42
USP39-218ENST00000493829 ANKRD33BA6NCL7 494 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 SNPHO15079 494 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 PEX1O43933 1283 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 SNX4O95219 450 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 LINGO3P0C6S8 592 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 ENDOUP21128 410 aaKnown RBP17.64■□□□□ 0.42
USP39-218ENST00000493829 PTNP21246 168 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 FUT4P22083 530 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 MAGEA2P43356 314 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 IDH2P48735 452 aaKnown RBP17.64■□□□□ 0.42
USP39-218ENST00000493829 TAS2R41P59536 307 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 PIN1Q13526 163 aaPredicted RBP17.64■□□□□ 0.42
USP39-218ENST00000493829 TOMM34Q15785 309 aaPredicted RBP17.64■□□□□ 0.42
USP39-218ENST00000493829 PLCZ1Q86YW0 608 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 ZNF440Q8IYI8 595 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 PAPD5Q8NDF8 572 aaKnown RBP17.64■□□□□ 0.42
USP39-218ENST00000493829 OR2M3Q8NG83 312 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 OR1J4Q8NGS1 313 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 OR5W2Q8NH69 310 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 ZNF524Q96C55 264 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 TMEM41AQ96HV5 264 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 FAM173AQ9BQD7 235 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 ZNF71Q9NQZ8 489 aaPredicted RBP17.64■□□□□ 0.42
USP39-218ENST00000493829 ARMC1Q9NVT9 282 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 VDAC3Q9Y277 283 aa17.64■□□□□ 0.42
USP39-218ENST00000493829 FAM32AQ9Y421 112 aaKnown RBP17.64■□□□□ 0.42
USP39-218ENST00000493829 LRRC3CA6NJW4 275 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 TRIM3O75382 744 aaPredicted RBP17.64■□□□□ 0.41
USP39-218ENST00000493829 CST1P01037 141 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 ITGA2P17301 1181 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 MEOX1P50221 254 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 SPIBQ01892 262 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 CBFBQ13951 182 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 LINC00303Q3SY05 128 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 IQCCQ4KMZ1 466 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 ARSKQ6UWY0 536 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 CYP4Z1Q86W10 505 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 C10orf67Q8IYJ2 551 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 SCMH1Q96GD3 660 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 FRMD6Q96NE9 622 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 CNTNAP3BQ96NU0 1288 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 CNTNAP3Q9BZ76 1288 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 SEMA6AQ9H2E6 1030 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 YY1AP1Q9H869 796 aa17.64■□□□□ 0.41
USP39-218ENST00000493829 FFAR1O14842 300 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 NTN1O95631 604 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 SLC6A8P48029 635 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 PMP22Q01453 160 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 PPP1R8Q12972 351 aaKnown RBP17.63■□□□□ 0.41
USP39-218ENST00000493829 QPRTQ15274 297 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 TOMM20Q15388 145 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms