RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CLDN15P56746 228 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 TFF3Q07654 80 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 GNA13Q14344 377 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 FGFBP1Q14512 234 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SQLEQ14534 574 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SYPL1Q16563 259 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 PLPPR5Q32ZL2 321 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 TIGD2Q4W5G0 525 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 AGKQ53H12 422 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 METTL21CQ5VZV1 264 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 GTF2IRD2BQ6EKJ0 949 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 BLOC1S3Q6QNY0 202 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 CBLN3Q6UW01 205 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 DNAJC14Q6Y2X3 702 aaPredicted RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 LRRC74BQ6ZQY2 392 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ESPNLQ6ZVH7 1005 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 GTF2IRD2Q86UP8 949 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 LILRA2Q8N149 483 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 TMCO5AQ8N6Q1 288 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 NAXEQ8NCW5 288 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 PNPT1Q8TCS8 783 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 GPR119Q8TDV5 335 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 TMEM234Q8WY98 164 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SMPDL3BQ92485 455 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 GTF2H4Q92759 462 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 INTS12Q96CB8 462 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ARSGQ96EG1 525 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 THOC1Q96FV9 657 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 MRGPRX4Q96LA9 322 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 RNF145Q96MT1 663 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 THUMPD3Q9BV44 507 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SFXN3Q9BWM7 321 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 PINK1Q9BXM7 581 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 PIGMQ9H3S5 423 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 TPT1P8Q9HAU6 139 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 NPHS2Q9NP85 383 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 MED4Q9NPJ6 270 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 TIGARQ9NQ88 270 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SERINC1Q9NRX5 453 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF446Q9NWS9 450 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 THUMPD1Q9NXG2 353 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 CALML5Q9NZT1 146 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 CLCF1Q9UBD9 225 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 KCNE5Q9UJ90 142 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 FOXD3Q9UJU5 478 aaPredicted RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 DCTN4Q9UJW0 460 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 MCTS1Q9ULC4 181 aaKnown RBP6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF232Q9UNY5 417 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 SLC35A3Q9Y2D2 325 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF175Q9Y473 711 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 DOCK7Q96N67 2140 aa6.29□□□□□ -1.4
TOP3A-207ENST00000493648 UQCRHLA0A096LP55 91 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 A0A096LPI6 279 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 A0A0G2JND7 137 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 AGAP5A6NIR3 686 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 H0YC42 278 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 CLIC1O00299 241 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 NR5A2O00482 541 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 OIP5O43482 229 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 KIAA0513O60268 411 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 TGM6O95932 706 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 DBIP07108 87 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 VIMP08670 466 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 TFPTP0C1Z6 253 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 UBTFL6P0CB48 400 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 TROVE2P10155 538 aaKnown RBP eCLIP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 FCGR2AP12318 317 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 UQCRBP14927 111 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 IL7RP16871 459 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PRKCAP17252 672 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 IGFBP2P18065 325 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PPIBP23284 216 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PSMA4P25789 261 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ELK4P28324 431 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 SSTR2P30874 369 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 UQCRC1P31930 480 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PGM1P36871 562 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 EIF1AXP47813 144 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 CRISP3P54108 245 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 TPD52P55327 224 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 CLDN20P56880 219 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 CARD18P57730 90 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 DSTNP60981 165 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 KCNJ10P78508 379 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 CHRNEQ04844 493 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 FOXF2Q12947 444 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PON3Q15166 354 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 QPRTQ15274 297 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 TOMM34Q15785 309 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 MAPK14Q16539 360 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 NDUFAF6Q330K2 333 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 COX20Q5RI15 118 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 HBMQ6B0K9 141 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PPP4R4Q6NUP7 873 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 POMZP3Q6PJE2 187 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 SLC2A7Q6PXP3 512 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PLXDC2Q6UX71 529 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 FRRS1Q6ZNA5 592 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms