RNA–Protein interactions for RNA: ENST00000493058.1

CAPN10-215, Transcript of calpain 10, human

TSL 5

Gene CAPN10, Length 907 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN10-215	ENST00000493058	NID1	P14543	1247 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	CPN1	P15169	458 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	PGC	P20142	388 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	POU3F2	P20265	443 aa	Predicted RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	RPS4Y1	P22090	263 aa	Known RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	EIF1	P41567	113 aa	Known RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	STAR	P49675	285 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	SMS	P52788	366 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	B3GALT5-AS1	P59052	145 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	RBBP4	Q09028	425 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	SKP2	Q13309	424 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	SCARB2	Q14108	478 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	SELPLG	Q14242	412 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	LARS2	Q15031	903 aa	Known RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	BCL2A1	Q16548	175 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZSWIM7	Q19AV6	140 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	PLPPR5	Q32ZL2	321 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	DCST1	Q5T197	706 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	C1orf185	Q5T7R7	199 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	REEP3	Q6NUK4	255 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	B3GNT6	Q6ZMB0	384 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	ULK2	Q8IYT8	1036 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	C10orf111	Q8N326	155 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	OR8J3	Q8NGG0	315 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	NFKBID	Q8NI38	313 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	GPR119	Q8TDV5	335 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	PHF10	Q8WUB8	498 aa	Known RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	RCN3	Q96D15	328 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	ARSG	Q96EG1	525 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	CCDC120	Q96HB5	630 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	ECSIT	Q9BQ95	431 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	ARMC7	Q9H6L4	198 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	KAT8	Q9H7Z6	458 aa	Known RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	EFCAB1	Q9HAE3	211 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	EXOSC3	Q9NQT5	275 aa	Known RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZNF337	Q9Y3M9	751 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	GPC6	Q9Y625	555 aa	Predicted RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	AP4B1	Q9Y6B7	739 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	HIVEP3	Q5T1R4	2406 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	UBR5	O95071	2799 aa	Predicted RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	DSPP	Q9NZW4	1301 aa		13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	PHF3	Q92576	2039 aa	Known RBP	13.56	□□□□□ -0.24
CAPN10-215	ENST00000493058	ARHGAP21	Q5T5U3	1957 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	CLDN24	A6NM45	220 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	SHISA8	B8ZZ34	492 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058		H0Y3Z8	333 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	AIM2	O14862	343 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	FAM107A	O95990	144 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	THBS1	P07996	1170 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	LINGO3	P0C6S8	592 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	ETS2	P15036	469 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	ADH6	P28332	368 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	PRDX6	P30041	224 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	SLC6A8	P48029	635 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	LHX2	P50458	406 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	EEFSEC	P57772	596 aa	Known RBP	13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	SRY	Q05066	204 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	ART3	Q13508	389 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZNF311	Q5JNZ3	666 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	RPTN	Q6XPR3	784 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	CHMP1B	Q7LBR1	199 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	SERPINA11	Q86U17	422 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	VRK2	Q86Y07	508 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	KRT73	Q86Y46	540 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	TREML1	Q86YW5	311 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	MEIOB	Q8N635	442 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	C11orf65	Q8NCR3	313 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	HIPK4	Q8NE63	616 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	OR10A6	Q8NH74	314 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZNF563	Q8TA94	476 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	TMEM234	Q8WY98	164 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	LRRC37B	Q96QE4	947 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	DMRTA2	Q96SC8	542 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	SLC39A3	Q9BRY0	314 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	SPATA5L1	Q9BVQ7	753 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	SPATA9	Q9BWV2	254 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	TRIM8	Q9BZR9	551 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	ANGPT4	Q9Y264	503 aa		13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.55	□□□□□ -0.24
CAPN10-215	ENST00000493058	HELZ2	Q9BYK8	2649 aa	Known RBP	13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	C7orf72	A4D263	438 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	WIPF3	A6NGB9	483 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZG16	O60844	167 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	SHOX2	O60902	331 aa	Predicted RBP	13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	PABPC4L	P0CB38	370 aa	Known RBP	13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	UQCRB	P14927	111 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZNF708	P17019	499 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	QPRT	Q15274	297 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	TMEM44	Q2T9K0	475 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	MRPL2	Q5T653	305 aa	Known RBP	13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZNF836	Q6ZNA1	936 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	SLC30A8	Q8IWU4	369 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZNF440	Q8IYI8	595 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	UBQLNL	Q8IYU4	475 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	FAM71C	Q8NEG0	241 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	FBXO27	Q8NI29	283 aa		13.54	□□□□□ -0.24
CAPN10-215	ENST00000493058	ZPLD1	Q8TCW7	415 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms