RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PROX2Q3B8N5 592 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 EIPR1Q53HC9 387 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 COX20Q5RI15 118 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 MAMSTRQ6ZN01 415 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 PTCHD4Q6ZW05 846 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 PRICKLE2Q7Z3G6 844 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 RETREG3Q86VR2 466 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 CARM1Q86X55 608 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 VRK2Q86Y07 508 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 ZADH2Q8N4Q0 377 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 OR52N2Q8NGI0 321 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 C16orf52Q8NHV5 167 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 GTF2H4Q92759 462 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 POP5Q969H6 163 aaKnown RBP4.16□□□□□ -1.74
TRA2B-215ENST00000492417 SCARF2Q96GP6 870 aaPredicted RBP4.16□□□□□ -1.74
TRA2B-215ENST00000492417 KCNS3Q9BQ31 491 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 PRR14Q9BWN1 585 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 DEFB127Q9H1M4 99 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 CLMPQ9H6B4 373 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 FOLH1BQ9HBA9 442 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 LYRM4Q9HD34 91 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 C11orf16Q9NQ32 467 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 CHD8Q9HCK8 2581 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 PTPRQQ9UMZ3 2332 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 FAM208BQ5VWN6 2430 aa4.16□□□□□ -1.74
TRA2B-215ENST00000492417 CHD9Q3L8U1 2897 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 RNASET2O00584 256 aaKnown RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 BCAS2O75934 225 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 DNAJB5O75953 348 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 AHSA1O95433 338 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 IGHEP01854 428 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 TPOP07202 933 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 C8BP07358 591 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 GP1BAP07359 652 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 PSKH1P11801 424 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ABOP16442 354 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 KDELR2P33947 212 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 MAGEA2P43356 314 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ALDH3A2P51648 485 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 EEFSECP57772 596 aaKnown RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 MAB21L1Q13394 359 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 SNTA1Q13424 505 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 RNASE12Q5GAN4 147 aaKnown RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 TMEM225Q6GV28 225 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 USP43Q70EL4 1123 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 COMMD2Q86X83 199 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ZZZ3Q8IYH5 903 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 OR51A7Q8NH64 312 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF420Q8TAQ5 688 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 BRIX1Q8TDN6 353 aaKnown RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 MOAP1Q96BY2 351 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 LCORQ96JN0 433 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 SLC41A2Q96JW4 573 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 PKP2Q99959 881 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 SLC22A4Q9H015 551 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 NXF5Q9H1B4 397 aaKnown RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 GPN1Q9HCN4 374 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 MED11Q9P086 117 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 KLK13Q9UKR3 277 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 TBC1D24Q9ULP9 559 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 RTTNQ86VV8 2226 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 A8MV72 311 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 NME4O00746 187 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 GPR37O15354 613 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 FOXS1O43638 330 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 LRP3O75074 770 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 KHDRBS3O75525 346 aaKnown RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ITGA10O75578 1167 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 CELA2AP08217 269 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF883P0CG24 379 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 MYL9P24844 172 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 PIGAP37287 484 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ATP4BP51164 291 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 SMIM11AP58511 58 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 FADDQ13158 208 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ILKQ13418 452 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 CEACAM7Q14002 265 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 RCAN2Q14206 197 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 AGAP7PQ5VUJ5 663 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 YOD1Q5VVQ6 348 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 SLC22A10Q63ZE4 541 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 CXXC5Q7LFL8 322 aaKnown RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 NUP54Q7Z3B4 507 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 GALNTL5Q7Z4T8 443 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 PRSS42Q7Z5A4 293 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 MARCH3Q86UD3 253 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 FUNDC1Q8IVP5 155 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 B3GNT7Q8NFL0 401 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 OR4N2Q8NGD1 307 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 IPCEF1Q8WWN9 437 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ISOC1Q96CN7 298 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF285Q96NJ3 590 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 AGAP4Q96P64 663 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF347Q96SE7 839 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 NUDT9Q9BW91 350 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 NPLQ9BXD5 320 aaPredicted RBP4.15□□□□□ -1.74
TRA2B-215ENST00000492417 C1QTNF3Q9BXJ4 246 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 SLC6A15Q9H2J7 730 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 MUC13Q9H3R2 512 aa4.15□□□□□ -1.74
TRA2B-215ENST00000492417 THUMPD1Q9NXG2 353 aaKnown RBP4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms