RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TIGD3Q6B0B8 471 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 ASB18Q6ZVZ8 466 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 SULF2Q8IWU5 870 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 WDSUB1Q8N9V3 476 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 OR4K17Q8NGC6 315 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 OR6T1Q8NGN1 323 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 OR1J4Q8NGS1 313 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 VANGL1Q8TAA9 524 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-230ENST00000491028 CANT1Q8WVQ1 401 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 PTGES2Q9H7Z7 377 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 IL1RAPQ9NPH3 570 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 AURKCQ9UQB9 309 aa16.98■□□□□ 0.31
MCF2L-230ENST00000491028 LOC400499M0QZD8 3231 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 LRRC3CA6NJW4 275 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 C17orf51A8MQB3 221 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 K7EM74 188 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 AP3D1O14617 1153 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 GNB5O14775 395 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 FRS3O43559 492 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 FABP3P05413 133 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 ITGA2P17301 1181 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 PGCP20142 388 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 SLC7A1P30825 629 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 ACAA2P42765 397 aaKnown RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 MAGEA2P43356 314 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 OR1E2P47887 323 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 MEOX1P50221 254 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 ERFP50548 548 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 CCR4P51679 360 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 ZFP1Q6P2D0 407 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 C19orf48Q6RUI8 117 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 LACC1Q8IV20 430 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 RBMXL3Q8N7X1 1067 aaKnown RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 ZFP62Q8NB50 900 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 PAPD5Q8NDF8 572 aaKnown RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 OR2M3Q8NG83 312 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 OR4D11Q8NGI4 311 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 C7orf34Q96L11 122 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 POLR2J2Q9GZM3 115 aaKnown RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 POLR2J3Q9H1A7 115 aaKnown RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 YY1AP1Q9H869 796 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 ZFP64Q9NPA5 681 aa16.97■□□□□ 0.31
MCF2L-230ENST00000491028 CCM2LQ9NUG4 571 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 TUBA8Q9NY65 449 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 MAP1BP46821 2468 aaKnown RBP16.97■□□□□ 0.31
MCF2L-230ENST00000491028 CBR3O75828 277 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 LINGO3P0C6S8 592 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 GKN3PP0CG01 181 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 SFTPCP11686 197 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 PRG2P13727 222 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 VLDLRP98155 873 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 FOXO1Q12778 655 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 GANABQ14697 944 aaKnown RBP16.96■□□□□ 0.31
MCF2L-230ENST00000491028 INPP5JQ15735 1006 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-230ENST00000491028 NPTX1Q15818 432 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 INAQ16352 499 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 OR5M10Q6IEU7 315 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 PIWIL3Q7Z3Z3 882 aaKnown RBP16.96■□□□□ 0.31
MCF2L-230ENST00000491028 ZDHHC21Q8IVQ6 265 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 NR4A3Q92570 626 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 STMN2Q93045 179 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 JSRP1Q96MG2 331 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-230ENST00000491028 MCHR1Q99705 422 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 WFDC6Q9BQY6 131 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 ZNF559Q9BR84 538 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 AMBRA1Q9C0C7 1298 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 DSN1Q9H410 356 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 ARMC1Q9NVT9 282 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 MED11Q9P086 117 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 B4GALT7Q9UBV7 327 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 B3GNT3Q9Y2A9 372 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 C15orf41Q9Y2V0 281 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 HRH3Q9Y5N1 445 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 ENPP4Q9Y6X5 453 aa16.96■□□□□ 0.31
MCF2L-230ENST00000491028 NINQ8N4C6 2090 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 PINLYPA6NC86 204 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 B4DXG7 233 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 H0YHG0 523 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 ERVH48-1M5A8F1 160 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 ADAM11O75078 769 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 FKBP6O75344 327 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 ENTPD5O75356 428 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 NUDT14O95848 222 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 ZNF41P51814 821 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-230ENST00000491028 DSCR4P56555 118 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-230ENST00000491028 COPZ1P61923 177 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 ELF3P78545 371 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-230ENST00000491028 HYAL4Q2M3T9 481 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 RPUSD3Q6P087 351 aaKnown RBP16.95■□□□□ 0.3
MCF2L-230ENST00000491028 DEF8Q6ZN54 512 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 CYP4Z1Q86W10 505 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 RBM45Q8IUH3 476 aaKnown RBP16.95■□□□□ 0.3
MCF2L-230ENST00000491028 LSMEM1Q8N8F7 131 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 GPR119Q8TDV5 335 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 PHF10Q8WUB8 498 aaKnown RBP16.95■□□□□ 0.3
MCF2L-230ENST00000491028 SLCO4A1Q96BD0 722 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 C1GALT1C1Q96EU7 318 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 ZNF300Q96RE9 604 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-230ENST00000491028 TRIM2Q9C040 744 aa16.95■□□□□ 0.3
MCF2L-230ENST00000491028 TAS2R10Q9NYW0 307 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms