RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	ACSM5	Q6NUN0	579 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	DPY19L2P2	Q6ZN68	376 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833		Q6ZPB1	254 aa	Predicted RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	TRIL	Q7L0X0	811 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	OAF	Q86UD1	273 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	LRRC28	Q86X40	367 aa	Predicted RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	VRK2	Q86Y07	508 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	MCAT	Q8IVS2	390 aa	Known RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	NRM	Q8IXM6	262 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	MMP21	Q8N119	569 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	OR8H2	Q8N162	312 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	CA13	Q8N1Q1	262 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SYS1	Q8N2H4	156 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SLC44A3	Q8N4M1	653 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	CAMKK1	Q8N5S9	505 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	EID2	Q8N6I1	236 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SCAI	Q8N9R8	606 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	FAM181A	Q8N9Y4	354 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SIMC1	Q8NDZ2	872 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	OR7G2	Q8NG99	324 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	OR10G6	Q8NH81	332 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	RPLP0P6	Q8NHW5	317 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	FLVCR1-AS1	Q8TAF5	88 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	ZDHHC1	Q8WTX9	485 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	KAT2A	Q92830	837 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	CDS1	Q92903	461 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	TSACC	Q96A04	125 aa	Predicted RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	C16orf58	Q96GQ5	468 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	DIRAS2	Q96HU8	199 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SLC46A1	Q96NT5	459 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	OR5M11	Q96RB7	305 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SECISBP2	Q96T21	854 aa	Known RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	DPYSL5	Q9BPU6	564 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	NEURL2	Q9BR09	285 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	C7orf50	Q9BRJ6	194 aa	Known RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	TTYH2	Q9BSA4	534 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	YIPF4	Q9BSR8	244 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	ACTR6	Q9GZN1	396 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	MCOLN1	Q9GZU1	580 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	UBQLN3	Q9H347	655 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	EQTN	Q9NQ60	294 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	UBQLN4	Q9NRR5	601 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	GPR27	Q9NS67	375 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	ERVK13-1	Q9NX77	482 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	CLDND1	Q9NY35	253 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	MRPL39	Q9NYK5	338 aa	Known RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	CLEC1B	Q9P126	229 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	C5AR2	Q9P296	337 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SERTAD3	Q9UJW9	196 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	CBLC	Q9ULV8	474 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	SLC7A7	Q9UM01	511 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF337	Q9Y3M9	751 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	HEMK1	Q9Y5R4	338 aa	Predicted RBP	5.88	□□□□□ -1.47
FN1-223	ENST00000490833	TMEM14A	Q9Y6G1	99 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	PMF1-BGLAP	U3KQ54	211 aa		5.88	□□□□□ -1.47
FN1-223	ENST00000490833	TRAV1-2	A0A0B4J238	106 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833		A0A0G2JN53	185 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FITM1	A5D6W6	292 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	TLCD2	A6NGC4	264 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	OR6C76	A6NM76	312 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	CENPBD1	B2RD01	187 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FAM25A	B3EWG3	89 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FAM25C	B3EWG5	89 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FAM25G	B3EWG6	89 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF879	B4DU55	563 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	TOX3	O15405	576 aa	Predicted RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	TBX1	O43435	398 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FCMR	O60667	390 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SEMA7A	O75326	666 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	GPX5	O75715	221 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	RGS9	O75916	674 aa	Predicted RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	KCNK2	O95069	426 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	CDRT1	O95170	752 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	CSF2	P04141	144 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SRF	P11831	508 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	IFI30	P13284	250 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	GABRG2	P18507	467 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FKBP2	P26885	142 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ACSL1	P33121	698 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	RORA	P35398	523 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	GRK6	P43250	576 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	EIF2B2	P49770	351 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	CAPZA1	P52907	286 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	GBX2	P52951	348 aa	Predicted RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	NRG3	P56975	720 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SCAND1	P57086	179 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	CLDN2	P57739	230 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	PPP2CB	P62714	309 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	RACK1	P63244	317 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	PPP2CA	P67775	309 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	GPLD1	P80108	840 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FUT5	Q11128	374 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF155	Q12901	538 aa	Predicted RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	CLN3	Q13286	438 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SSX1	Q16384	188 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	DUSP5	Q16690	384 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	PRTG	Q2VWP7	1150 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	C9orf50	Q5SZB4	431 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	MRPL2	Q5T653	305 aa	Known RBP	5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms