RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PRAMEF8Q5VWM4 474 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 PRAMEF7Q5VXH5 474 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 HEPHL1Q6MZM0 1159 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TUBA3EQ6PEY2 450 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 VHLLQ6RSH7 139 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 VTCN1Q7Z7D3 282 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 AMIGO2Q86SJ2 522 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF615Q8N8J6 731 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 CDRT4Q8N9R6 151 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 C7orf57Q8NEG2 295 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 OR7G1Q8NGA0 311 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 BBS10Q8TAM1 723 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 ADAMTS15Q8TE58 950 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 SLC9A6Q92581 669 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 CDS1Q92903 461 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 VSTM2LQ96N03 204 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TRNT1Q96Q11 434 aaKnown RBP6.94□□□□□ -1.3
CLDN1-202ENST00000490800 STACQ99469 402 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TREX2Q9BQ50 279 aaPredicted RBP6.94□□□□□ -1.3
CLDN1-202ENST00000490800 UTP23Q9BRU9 249 aaKnown RBP6.94□□□□□ -1.3
CLDN1-202ENST00000490800 LMF2Q9BU23 707 aaKnown RBP6.94□□□□□ -1.3
CLDN1-202ENST00000490800 CNPPD1Q9BV87 410 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 RSPO3Q9BXY4 272 aaPredicted RBP6.94□□□□□ -1.3
CLDN1-202ENST00000490800 HES7Q9BYE0 225 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 PIGUQ9H490 435 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 CDCP1Q9H5V8 836 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 FOLH1BQ9HBA9 442 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 MMP25Q9NPA2 562 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 KLHL1Q9NR64 748 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 DUSP22Q9NRW4 184 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 EXD2Q9NVH0 621 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 SH3BGRL2Q9UJC5 107 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 LIPT1Q9Y234 373 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 CENPEQ02224 2701 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 A0A0G2JPF8 293 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 GXYLT2A0PJZ3 443 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SYNDIG1LA6NDD5 238 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 A8MVJ9 347 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 HNRNPCL2B2RXH8 293 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 HNRNPCL3B7ZW38 293 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 PRSS44E7EML9 344 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CCL21O00585 134 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 PDE9AO76083 593 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 NKX2-2O95096 273 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 MFN2O95140 757 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 H6PDO95479 791 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 AGR2O95994 175 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 IFNA14P01570 189 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 IGKV3-11P04433 115 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 HNRNPCL4P0DMR1 293 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 HOXB6P17509 224 aaKnown RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 FASP25445 335 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 PEX2P28328 305 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 GABRA3P34903 492 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 VHLP40337 213 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CRISP3P54108 245 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SELENOWP63302 87 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 KCNJ10P78508 379 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 OC90Q02509 493 aaPredicted RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CHRNEQ04844 493 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 GNA13Q14344 377 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 OR1C1Q15619 314 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 TRIP10Q15642 601 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 ARHGAP11BQ3KRB8 267 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 IQCCQ4KMZ1 466 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 GPAT3Q53EU6 434 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 ATAD3BQ5T9A4 648 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 OGFRL1Q5TC84 451 aaPredicted RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 LPCAT4Q643R3 524 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CRYBG3Q68DQ2 2970 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SLC25A25Q6KCM7 469 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 NPSR1Q6W5P4 371 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 C16orf62Q7Z3J2 963 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 GALNTL5Q7Z4T8 443 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 TSEN54Q7Z6J9 526 aaKnown RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 MRGPRGQ86SM5 289 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CDH24Q86UP0 819 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 RPS19BP1Q86WX3 136 aaKnown RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SLC5A8Q8N695 610 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF321PQ8N8H1 164 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SMYD1Q8NB12 490 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 MDS2Q8NDY4 140 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CHDHQ8NE62 594 aaPredicted RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 GPR32P1Q8NGA4 272 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 OR14A16Q8NHC5 309 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 C16orf52Q8NHV5 167 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SLC2A12Q8TD20 617 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 ELP5Q8TE02 316 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF721Q8TF20 911 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 PIK3R3Q92569 461 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CENPNQ96H22 339 aaPredicted RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SENP5Q96HI0 755 aaPredicted RBP6.93□□□□□ -1.3
CLDN1-202ENST00000490800 FBXL20Q96IG2 436 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 TPD52L3Q96J77 140 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 C7orf34Q96L11 122 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 DHRS1Q96LJ7 313 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 COL21A1Q96P44 957 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 DOHHQ9BU89 302 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 BTBD2Q9BX70 525 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 OR10A5Q9H207 317 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms