RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 C1QL4Q86Z23 238 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 TMEM139Q8IV31 216 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 FAM9CQ8IZT9 166 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 OR4C3Q8NH37 302 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 UBASH3BQ8TF42 649 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 ZFP90Q8TF47 636 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 DUX5Q96PT3 197 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 FRG2BQ96QU4 278 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 CA10Q9NS85 328 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 TAS2R16Q9NYV7 291 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 DMGDHQ9UI17 866 aaKnown RBP11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 MRTO4Q9UKD2 239 aaKnown RBP11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 SLC12A4Q9UP95 1085 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 WNK2Q9Y3S1 2297 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 GJE1A6NN92 205 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 ZNF724A8MTY0 619 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 DNALI1O14645 258 aaPredicted RBP11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 WNT9BO14905 357 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 COQ9O75208 318 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 OXSR1O95747 527 aaPredicted RBP11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 ITGA5P08648 1049 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 ADRA2CP18825 462 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 ELK4P28324 431 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 PRIM2P49643 509 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 RAC3P60763 192 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 PFKFB4Q16877 469 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 FAM219BQ5XKK7 198 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 TTC19Q6DKK2 380 aaPredicted RBP11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 OR7E24Q6IFN5 339 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 C1QL2Q7Z5L3 287 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 CARM1Q86X55 608 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 OR51F2Q8NH61 342 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 FBXO27Q8NI29 283 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 BAG1Q99933 345 aaPredicted RBP11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 FARSBQ9NSD9 589 aaKnown RBP11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 ASB6Q9NWX5 421 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
EXOSC3-207ENST00000490516 POM121CA8CG34 1229 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 OR7A17O14581 309 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 IL3P08700 152 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 EIF1P41567 113 aaKnown RBP11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 KHKP50053 298 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 EFNB3Q15768 340 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 ZKSCAN8Q15776 578 aaPredicted RBP11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 TMEM107Q6UX40 140 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 C1orf52Q8N6N3 182 aaKnown RBP11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 PIK3R3Q92569 461 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 MRGPRX4Q96LA9 322 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 SLITRK2Q9H156 845 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 NOL11Q9H8H0 719 aaKnown RBP11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
EXOSC3-207ENST00000490516 UPK1AO00322 258 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 PDE5AO76074 875 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 PSMG1O95456 288 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 GAAP10253 952 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 NTF4P34130 210 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 GABRA3P34903 492 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 TRA2BP62995 288 aaKnown RBP11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 IL13RA1P78552 427 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 IL1RL1Q01638 556 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 TRADDQ15628 312 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 ZNHIT3Q15649 155 aaPredicted RBP11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 GLE1Q53GS7 698 aaKnown RBP11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 PDIK1LQ8N165 341 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 TEX29Q8N6K0 151 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 OR52E4Q8NGH9 312 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 MS4A14Q96JA4 679 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 GPR22Q99680 433 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 LMF2Q9BU23 707 aaKnown RBP11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 TMPRSS13Q9BYE2 586 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 NMRAL1Q9HBL8 299 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 SLC35C2Q9NQQ7 365 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 G6PC2Q9NQR9 355 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 ACSS1Q9NUB1 689 aaPredicted RBP11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 GIMAP4Q9NUV9 329 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 NSMCE4AQ9NXX6 385 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 PDP1Q9P0J1 537 aaPredicted RBP11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 RNF14Q9UBS8 474 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 C19orf53Q9UNZ5 99 aaPredicted RBP11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 AMDHD2Q9Y303 409 aa11.86□□□□□ -0.51
EXOSC3-207ENST00000490516 A0A087WV62 115 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 TRAV20A0A0B4J274 112 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 SH3PXD2BA1X283 911 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 CXorf49A8MYA2 514 aaPredicted RBP11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 KCNH1O95259 989 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 JUNP05412 331 aaKnown RBP11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 ERCC1P07992 297 aaPredicted RBP11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 IGFBP1P08833 259 aaPredicted RBP11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 GFAPP14136 432 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 SLC7A1P30825 629 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 MPIP34949 423 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 IFT88Q13099 833 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 SLC29A2Q14542 456 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 FASTKD3Q14CZ7 662 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms