RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 EEF1E1-BLOC1S5C9J1V9 151 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 LINC01387J3KSC0 135 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 GTPBP1O00178 669 aaKnown RBP16.29■□□□□ 0.2
COL9A3-214ENST00000490398 EIF1AYO14602 144 aaKnown RBP16.29■□□□□ 0.2
COL9A3-214ENST00000490398 EEF1E1O43324 174 aaKnown RBP16.29■□□□□ 0.2
COL9A3-214ENST00000490398 AQP8O94778 261 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 SOX30O94993 753 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 AK1P00568 194 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 IL6P05231 212 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 CHRM4P08173 479 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 OPRM1P35372 400 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 P2RX1P51575 399 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 ZNF41P51814 821 aaPredicted RBP16.29■□□□□ 0.2
COL9A3-214ENST00000490398 POLR2JP52435 117 aaKnown RBP16.29■□□□□ 0.2
COL9A3-214ENST00000490398 SKP2Q13309 424 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 PON3Q15166 354 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 FBXL19-AS1Q494R0 122 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 SLC2A7Q6PXP3 512 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 P4HA3Q7Z4N8 544 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 LUZP2Q86TE4 346 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 FBXO27Q8NI29 283 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 RNASE6Q93091 150 aaKnown RBP16.29■□□□□ 0.2
COL9A3-214ENST00000490398 C14orf79Q96F83 325 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 LURAP1Q96LR2 239 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 SAP130Q9H0E3 1048 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 WDR45Q9Y484 360 aa16.29■□□□□ 0.2
COL9A3-214ENST00000490398 RFXANKO14593 260 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 POLR3GO15318 223 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-214ENST00000490398 ZNF264O43296 627 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 CYP7B1O75881 506 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 TGDSO95455 350 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 H6PDO95479 791 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 NUDT14O95848 222 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 IL18BPO95998 194 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 UBL4AP11441 157 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 EIF1AXP47813 144 aaKnown RBP16.28■□□□□ 0.2
COL9A3-214ENST00000490398 GPAT3Q53EU6 434 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 VWA1Q6PCB0 445 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 OR10D3Q8NH80 312 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 GTF2H4Q92759 462 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 MAGEB18Q96M61 343 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 SFXN3Q9BWM7 321 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 SLC38A1Q9H2H9 487 aa16.28■□□□□ 0.2
COL9A3-214ENST00000490398 HRNRQ86YZ3 2850 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-214ENST00000490398 FAM234BA2RU67 622 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 H3BNH8 94 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 TNFSF11O14788 317 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 CXCL13O43927 109 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 EIF4E2O60573 245 aaKnown RBP16.27■□□□□ 0.2
COL9A3-214ENST00000490398 ADAM11O75078 769 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 NTN1O95631 604 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 AGR2O95994 175 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 UBTFL6P0CB48 400 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-214ENST00000490398 ETFAP13804 333 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 PRKCAP17252 672 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 HOXB9P17482 250 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-214ENST00000490398 SSTR2P30874 369 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 PGM1P36871 562 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 KIR2DL2P43627 348 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-214ENST00000490398 CCR4P51679 360 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 RAC1P63000 192 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 SIRPAP78324 504 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 FGFBP1Q14512 234 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 ATAD3BQ5T9A4 648 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 AP1ARQ63HQ0 302 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 CHMP1BQ7LBR1 199 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 BTLAQ7Z6A9 289 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 ZZZ3Q8IYH5 903 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 ZNF619Q8N2I2 560 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 TMCO5AQ8N6Q1 288 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 OR5W2Q8NH69 310 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 STARD4Q96DR4 205 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 CCDC28BQ9BUN5 200 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 THUMPD3Q9BV44 507 aaKnown RBP16.27■□□□□ 0.2
COL9A3-214ENST00000490398 PAIP1Q9H074 479 aaKnown RBP16.27■□□□□ 0.2
COL9A3-214ENST00000490398 RNF122Q9H9V4 155 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 SLC52A3Q9NQ40 469 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 CRIM1Q9NZV1 1036 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 CLEC4AQ9UMR7 237 aa16.27■□□□□ 0.2
COL9A3-214ENST00000490398 ADAMDEC1O15204 470 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 CSTAP01040 98 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 SFTPDP35247 375 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 MRPL19P49406 292 aaKnown RBP16.26■□□□□ 0.19
COL9A3-214ENST00000490398 EEFSECP57772 596 aaKnown RBP16.26■□□□□ 0.19
COL9A3-214ENST00000490398 MYBPHQ13203 477 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 QPRTQ15274 297 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 GUSBP1Q15486 140 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 PPP4R4Q6NUP7 873 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 MED12LQ86YW9 2145 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 MSRB3Q8IXL7 192 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 LILRA2Q8N149 483 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 TRIML2Q8N7C3 387 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 CNEP1R1Q8N9A8 125 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 FAM71CQ8NEG0 241 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 ATP6V1C2Q8NEY4 427 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 OR2V1Q8NHB1 315 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 ZFP3Q96NJ6 502 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 SRXN1Q9BYN0 137 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 LAT2Q9GZY6 243 aa16.26■□□□□ 0.19
COL9A3-214ENST00000490398 MCCC2Q9HCC0 563 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms