RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 DNAJB12Q9NXW2 375 aaKnown RBP13.05□□□□□ -0.32
HLA-F-229ENST00000489502 ERRFI1Q9UJM3 462 aaPredicted RBP13.05□□□□□ -0.32
HLA-F-229ENST00000489502 CAMK2AQ9UQM7 478 aa13.05□□□□□ -0.32
HLA-F-229ENST00000489502 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
HLA-F-229ENST00000489502 SLC35A3Q9Y2D2 325 aa13.05□□□□□ -0.32
HLA-F-229ENST00000489502 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 H3BML4 177 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 AP3D1O14617 1153 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 BCKDKO14874 412 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 LRRTM2O43300 516 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 EIF4E2O60573 245 aaKnown RBP13.04□□□□□ -0.32
HLA-F-229ENST00000489502 ADAM11O75078 769 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 RNF224P0DH78 156 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 RYKP34925 604 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 PCGF2P35227 344 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 GCKP35557 465 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 GZMMP51124 257 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 SLC7A2P52569 658 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 CASP6P55212 293 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 EEF1A1P68104 462 aaKnown RBP13.04□□□□□ -0.32
HLA-F-229ENST00000489502 KCNC4Q03721 635 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 SRSF1Q07955 248 aaKnown RBP eCLIP13.04□□□□□ -0.32
HLA-F-229ENST00000489502 ART3Q13508 389 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 QPRTQ15274 297 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 WLSQ5T9L3 541 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 PRAMEF8Q5VWM4 474 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 PRAMEF7Q5VXH5 474 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 FAM91A1Q658Y4 838 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 VASNQ6EMK4 673 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 ZNF585AQ6P3V2 769 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 SERPINA11Q86U17 422 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 COMTD1Q86VU5 262 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 CALHM3Q86XJ0 350 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 FITM2Q8N6M3 262 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 HIPK4Q8NE63 616 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 TOR1AIP2Q8NFQ8 470 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 OR5W2Q8NH69 310 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 FBXO27Q8NI29 283 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 SMPDL3BQ92485 455 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 RELTQ969Z4 430 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 TIMP4Q99727 224 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 SH3GL1Q99961 368 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 ECSITQ9BQ95 431 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 GPATCH1Q9BRR8 931 aaKnown RBP13.04□□□□□ -0.32
HLA-F-229ENST00000489502 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 EFCAB1Q9HAE3 211 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 CACYBPQ9HB71 228 aaKnown RBP13.04□□□□□ -0.32
HLA-F-229ENST00000489502 RLIMQ9NVW2 624 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 CMTM6Q9NX76 183 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 DOPEY1Q5JWR5 2465 aa13.04□□□□□ -0.32
HLA-F-229ENST00000489502 A0A087WZY1 265 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 KDM4EB2RXH2 506 aaPredicted RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 CCL21O00585 134 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 NME4O00746 187 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 SEC14L5O43304 696 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 FRS3O43559 492 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 ACTL6AO96019 429 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 OPN1SWP03999 348 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 THBS1P07996 1170 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 LINGO3P0C6S8 592 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 PABPC4LP0CB38 370 aaKnown RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 POU3F2P20265 443 aaPredicted RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 ADH7P40394 386 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 LHX2P50458 406 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 SRYQ05066 204 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 RBBP4Q09028 425 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 TMEM44Q2T9K0 475 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 GXYLT1Q4G148 440 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 ZNF311Q5JNZ3 666 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 RNF220Q5VTB9 566 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 C8orf82Q6P1X6 216 aaPredicted RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 AAGABQ6PD74 315 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 HACD2Q6Y1H2 254 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 ARPINQ7Z6K5 226 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 CMIPQ8IY22 773 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 UBQLNLQ8IYU4 475 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 CLIP4Q8N3C7 705 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 METTL25Q8N6Q8 603 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 POC1BQ8TC44 478 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 GPR119Q8TDV5 335 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 RSPO3Q9BXY4 272 aaPredicted RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 TP63Q9H3D4 680 aaPredicted RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 TMEM185BQ9H7F4 350 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 TAGLN3Q9UI15 199 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 SLC5A6Q9Y289 635 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 MRPS18CQ9Y3D5 142 aaKnown RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 CHST2Q9Y4C5 530 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 GPC6Q9Y625 555 aaPredicted RBP13.03□□□□□ -0.32
HLA-F-229ENST00000489502 BAHCC1Q9P281 2608 aa13.03□□□□□ -0.32
HLA-F-229ENST00000489502 CDHR4A6H8M9 788 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 FIGNL2A6NMB9 653 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 FAM220BPB1ANY3 271 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 H0Y3Z8 333 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 H0YC42 278 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 AGFG2O95081 481 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 GKN3PP0CG01 181 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms