RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PIWIL2Q8TC59 973 aaKnown RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 TMEM234Q8WY98 164 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 FIG4Q92562 907 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 TLCD1Q96CP7 247 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 KLHL15Q96M94 604 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 CCDC115Q96NT0 180 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 GPATCH1Q9BRR8 931 aaKnown RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 MED18Q9BUE0 208 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 RTN4RQ9BZR6 473 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 NMUR2Q9GZQ4 415 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 POLE3Q9NRF9 147 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 AIG1Q9NVV5 245 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 GALNT8Q9NY28 637 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF226Q9NYT6 803 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 BTNL2Q9UIR0 455 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 MKLN1Q9UL63 735 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 LIPT1Q9Y234 373 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SLC35A3Q9Y2D2 325 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 WDR45Q9Y484 360 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SPIN1Q9Y657 262 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 EML6Q6ZMW3 1958 aa8.21□□□□□ -1.09
HDAC6-232ENST00000489053 SH3D21A4FU49 640 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 A6NNC1 897 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 C9JVG2 144 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 CXCL13O43927 109 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 NR2F1P10589 423 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 POU2F1P14859 743 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 PGCP20142 388 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 DNASE1P24855 282 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ADH6P28332 368 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 UFM1P61960 85 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 FOXF1Q12946 379 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 GSTA3Q16772 222 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ARHGAP11BQ3KRB8 267 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 PDCD4Q53EL6 469 aaKnown RBP8.21□□□□□ -1.1
HDAC6-232ENST00000489053 TMEM201Q5SNT2 666 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 POMZP3Q6PJE2 187 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 DNAJC14Q6Y2X3 702 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ADGRE4PQ86SQ3 457 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 RNF130Q86XS8 419 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 LURAP1LQ8IV03 231 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 MIER2Q8N344 545 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ACBD4Q8NC06 268 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 CHDHQ8NE62 594 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-232ENST00000489053 FBXO27Q8NI29 283 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 LINC01560Q8TB33 94 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 OIT3Q8WWZ8 545 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ZNF75CPQ92670 426 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-232ENST00000489053 RAB8BQ92930 207 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ROPN1LQ96C74 230 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 NEURL3Q96EH8 262 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 GMPPAQ96IJ6 420 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ITCHQ96J02 903 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 MARK4Q96L34 752 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 MRGPRX4Q96LA9 322 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ATP6V1G3Q96LB4 118 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 SDF2Q99470 211 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 KLHL4Q9C0H6 718 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 GLRX2Q9NS18 164 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-232ENST00000489053 KCNE3Q9Y6H6 103 aa8.21□□□□□ -1.1
HDAC6-232ENST00000489053 PHF3Q92576 2039 aaKnown RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 CELSR1Q9NYQ6 3014 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 HMGB1P1B2RPK0 211 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 C16orf97H3BN30 126 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ZNF195O14628 629 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 KLF11O14901 512 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 CTAG2O75638 210 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 GOSR1O95249 250 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 GSNP06396 782 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ALDOCP09972 364 aaKnown RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 UBTFL6P0CB48 400 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 TFPIP10646 304 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 RYKP34925 604 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 CD79BP40259 229 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 CRATP43155 626 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 SLC6A8P48029 635 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 KRTAP10-9P60411 292 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 MERTKQ12866 999 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 SELENBP1Q13228 472 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 QPRTQ15274 297 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 RNPS1Q15287 305 aaKnown RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 NDUFAF6Q330K2 333 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 TMEM176BQ3YBM2 270 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 TIGD2Q4W5G0 525 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 SLC9B1Q4ZJI4 515 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 EXOSC6Q5RKV6 272 aaKnown RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 SAXO2Q658L1 398 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 FAM214BQ7L5A3 538 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ZNF619Q8N2I2 560 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ARFGAP2Q8N6H7 521 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 OR6K3Q8NGY3 331 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 PNPT1Q8TCS8 783 aaKnown RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 MIPOL1Q8TD10 442 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ST8SIA1Q92185 356 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 OSTF1Q92882 214 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 CPNE4Q96A23 557 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ZHX1-C8orf76Q96EF9 292 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 DACH2Q96NX9 599 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 THUMPD3Q9BV44 507 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms