RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CNIH4Q9P003 139 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 BLOC1S6Q9UL45 172 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 PCNX3Q9H6A9 2034 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 A0A1W2PQD3 144 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 SCDO00767 359 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 OIP5O43482 229 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 XPNPEP2O43895 674 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 REM1O75628 298 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 STK17BO94768 372 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 OR6B1O95007 311 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 IL12BP29460 328 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 FMO3P31513 532 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 IDH2P48735 452 aaKnown RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 CDC42P60953 191 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 PCOLCEQ15113 449 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 SMN1Q16637 294 aaKnown RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 TMEM236Q5W0B7 351 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 DESI1Q6ICB0 168 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 LINC00114Q6XXX2 140 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 RASSF6Q6ZTQ3 369 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 GLRX5Q86SX6 157 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 SATL1Q86VE3 508 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 MEX3DQ86XN8 651 aaKnown RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 RNF113BQ8IZP6 322 aaKnown RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 OR2Y1Q8NGV0 311 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 TMEM239Q8WW34 195 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 SGCDQ92629 289 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 TAAR9Q96RI9 348 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 FAM192AQ9GZU8 254 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF292O60281 2723 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 TRBV11-1A0A0K0K1C0 115 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 A0A1W2PQ72 361 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 OR6C70A6NIJ9 312 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 ALG1L2C9J202 215 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 H3BN98 237 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 M0R129 80 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 ADAM10O14672 748 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 NADKO95544 446 aaPredicted RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 MT-CO3P00414 261 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 UBL4AP11441 157 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 POU1F1P28069 291 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 GPR4P46093 362 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 SLC35A2P78381 396 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 BROXQ5VW32 411 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 KIRREL2Q6UWL6 708 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 RRM2BQ7LG56 351 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 LSRQ86X29 649 aaPredicted RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 BPIFB6Q8NFQ5 453 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 GRHL3Q8TE85 626 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 MPP4Q96JB8 637 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 PLA2G12AQ9BZM1 189 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 RTN4RQ9BZR6 473 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 DUSP21Q9H596 190 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 LIN28AQ9H9Z2 209 aaKnown RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 SLC25A19Q9HC21 320 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 NCDNQ9UBB6 729 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 PISDQ9UG56 409 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 PTRH2Q9Y3E5 179 aaKnown RBP8.66□□□□□ -1.02
SF3B1-211ENST00000487698 PCDHGA3Q9Y5H0 932 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 AHCTF1Q8WYP5 2266 aa8.66□□□□□ -1.02
SF3B1-211ENST00000487698 CPAMD8Q8IZJ3 1885 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 CCDC187A0A096LP49 1063 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 IGHV1-45A0A0A0MS14 117 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 SMIM31A0A1B0GVY4 71 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 PLD2O14939 933 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF264O43296 627 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 FADS1O60427 444 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 MPZL2O60487 215 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF354AO60765 605 aaPredicted RBP8.65□□□□□ -1.02
SF3B1-211ENST00000487698 DKK1O94907 266 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 COX6A1P12074 109 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 HPGDP15428 266 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 STAT5AP42229 794 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 RBM34P42696 430 aaKnown RBP8.65□□□□□ -1.02
SF3B1-211ENST00000487698 CTBP2P56545 445 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 NRG3P56975 720 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 CSNK2BP67870 215 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 CDK5Q00535 292 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 PRKCDQ05655 676 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 EIF3IQ13347 325 aaKnown RBP8.65□□□□□ -1.02
SF3B1-211ENST00000487698 ALG10BQ5I7T1 473 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 ULK3Q6PHR2 472 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 CBLN3Q6UW01 205 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF620Q6ZNG0 422 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 MRGPREQ86SM8 312 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 CLDN22Q8N7P3 220 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 GATSQ8NAP1 163 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 OR8D4Q8NGM9 314 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 PFN4Q8NHR9 129 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 RNF138Q8WVD3 245 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 HS6ST2Q96MM7 605 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 DEPDC7Q96QD5 511 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 SIGLEC11Q96RL6 698 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF700Q9H0M5 742 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 RBM38Q9H0Z9 239 aaKnown RBP8.65□□□□□ -1.02
SF3B1-211ENST00000487698 DSN1Q9H410 356 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 EGLN3Q9H6Z9 239 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 KRCC1Q9NPI7 259 aaPredicted RBP8.65□□□□□ -1.02
SF3B1-211ENST00000487698 MEPEQ9NQ76 525 aaPredicted RBP8.65□□□□□ -1.02
SF3B1-211ENST00000487698 C20orf141Q9NUB4 165 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms