RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TAB1Q15750 504 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 DCAF12Q5T6F0 453 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SEL1L2Q5TEA6 688 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SDHAF4Q5VUM1 108 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 FAM53AQ6NSI3 398 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SCYL2Q6P3W7 929 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 FAM159AQ6UWV7 190 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 ARSKQ6UWY0 536 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SCD5Q86SK9 330 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SLC13A5Q86YT5 568 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PSTKQ8IV42 348 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SLC22A15Q8IZD6 547 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 ARHGAP18Q8N392 663 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 MMGT1Q8N4V1 131 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 DCLK2Q8N568 766 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 OR5T2Q8NGG2 359 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 MAIP1Q8WWC4 291 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 MS4A14Q96JA4 679 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 MAGED4Q96JG8 741 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 CAPZA3Q96KX2 299 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 TGS1Q96RS0 853 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 CXXC4Q9H2H0 198 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 FNDC4Q9H6D8 234 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 NMUR1Q9HB89 426 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PALMDQ9NP74 551 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 TBK1Q9UHD2 729 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PCSK1NQ9UHG2 260 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF580Q9UK33 172 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 MGAT4BQ9UQ53 548 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 ASB3Q9Y575 518 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 U3KQV3 271 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 COL4A4P53420 1690 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PATJQ8NI35 1801 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 GREB1Q4ZG55 1949 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 hCG_1818297A0A087WSY0 165 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 A0A087WW49 117 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF840PA6NDX5 716 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 HIDE1A8MVS5 230 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF487B1APH4 448 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PRRG1O14668 218 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 KIAA0513O60268 411 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 VPS26AO75436 327 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 FGF19O95750 216 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ANGPTL1O95841 491 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 IGLV2-11P01706 119 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 IGHEP01854 428 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 CA3P07451 260 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PAICSP22234 425 aaKnown RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 IL4RP24394 825 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 TIMP3P35625 211 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 CDKN2BP42772 138 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 HCAR3P49019 387 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 NPY2RP49146 381 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PGFP49763 221 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 FHITP49789 147 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 CDH6P55285 790 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 GUCY2DQ02846 1103 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ELP6Q0PNE2 266 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 TWF1Q12792 350 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PLD1Q13393 1074 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 GPM6BQ13491 265 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 RFTN1Q14699 578 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 SIX1Q15475 284 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 DPYSL2Q16555 572 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 CLPPQ16740 277 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 TFDP3Q5H9I0 405 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 BRMS1LQ5PSV4 323 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 CES4AQ5XG92 561 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 SLC25A24Q6NUK1 477 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF730Q6ZMV8 503 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ERASQ7Z444 233 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ITIH5Q86UX2 942 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 C17orf64Q86WR6 236 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 FAM131BQ86XD5 332 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF573Q86YE8 665 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 CCDC50Q8IVM0 306 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 MISPQ8IVT2 679 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 LSMEM2Q8N112 164 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 BCORP1Q8N888 145 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PRELID2Q8N945 189 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 RELL2Q8NC24 303 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 STKLD1Q8NE28 680 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 C8orf46Q8TAG6 207 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 RNF139Q8WU17 664 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 RAPGEF5Q92565 580 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 P3H4Q92791 437 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 FBXO32Q969P5 355 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PSMG2Q969U7 264 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 MRPL24Q96A35 216 aaKnown RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 NTAN1Q96AB6 310 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 FAF2Q96CS3 445 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 DTNBP1Q96EV8 351 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 SERPINB11Q96P15 392 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 UHRF2Q96PU4 802 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 RNF157Q96PX1 679 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 NODALQ96S42 347 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 PEBP4Q96S96 227 aa3.45□□□□□ -1.86
PTCD3-216ENST00000487043 SNRNP25Q9BV90 132 aaKnown RBP3.45□□□□□ -1.86
PTCD3-216ENST00000487043 LRRC19Q9H756 370 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms