RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 RUNDC3AQ59EK9 446 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 EIF3MQ7L2H7 374 aaKnown RBP11.89□□□□□ -0.51
SF1-216ENST00000486867 MAMDC2Q7Z304 686 aaPredicted RBP11.89□□□□□ -0.51
SF1-216ENST00000486867 MRGPRGQ86SM5 289 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 LACC1Q8IV20 430 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 C10orf111Q8N326 155 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 ACBD4Q8NC06 268 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 OR5W2Q8NH69 310 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 MBD3L2Q8NHZ7 208 aaPredicted RBP11.89□□□□□ -0.51
SF1-216ENST00000486867 POC1BQ8TC44 478 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 RND1Q92730 232 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 ZNF524Q96C55 264 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 ANKRD27Q96NW4 1050 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 CGREF1Q99674 301 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 NPAS1Q99742 590 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 TREX2Q9BQ50 279 aaPredicted RBP11.89□□□□□ -0.51
SF1-216ENST00000486867 TMEM38AQ9H6F2 299 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 CLCF1Q9UBD9 225 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 CORO2BQ9UQ03 480 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 CARD8Q9Y2G2 431 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 ZNF337Q9Y3M9 751 aa11.89□□□□□ -0.51
SF1-216ENST00000486867 A0A0G2JPF8 293 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 BBIP1A8MTZ0 92 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 HNRNPCL2B2RXH8 293 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 HNRNPCL3B7ZW38 293 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 FXYD1O00168 92 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 FAAHO00519 579 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 ANGPT2O15123 496 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 HNRNPCL1O60812 293 aaKnown RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 BCAS1O75363 584 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 TOXO94900 526 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 CSTAP01040 98 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 NPPAP01160 153 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 THBS1P07996 1170 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 HNRNPCL4P0DMR1 293 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 NID1P14543 1247 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 ELK4P28324 431 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 EIF1P41567 113 aaKnown RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 ZNF41P51814 821 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 SEC24CP53992 1094 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 CRISP3P54108 245 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 KCNJ10P78508 379 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 PMPCAQ10713 525 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 GNA13Q14344 377 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 CDSNQ15517 529 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 ADRM1Q16186 407 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 NDUFAF6Q330K2 333 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 RAET1LQ5VY80 246 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 NET1Q7Z628 596 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 GGNQ86UU5 652 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 GRAMD2AQ8IUY3 354 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 ASB5Q8WWX0 329 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 SH3YL1Q96HL8 342 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 MRGPRX4Q96LA9 322 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 TUBA1CQ9BQE3 449 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 PLEKHB1Q9UF11 243 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 CAMK2AQ9UQM7 478 aa11.88□□□□□ -0.51
SF1-216ENST00000486867 RPH3AQ9Y2J0 694 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 GPC6Q9Y625 555 aaPredicted RBP11.88□□□□□ -0.51
SF1-216ENST00000486867 FREM1Q5H8C1 2179 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ITPR2Q14571 2701 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 KDM4EB2RXH2 506 aaPredicted RBP11.87□□□□□ -0.51
SF1-216ENST00000486867 GTPBP1O00178 669 aaKnown RBP11.87□□□□□ -0.51
SF1-216ENST00000486867 ADAMDEC1O15204 470 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 SNX3O60493 162 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 BCHEP06276 602 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 DBIP07108 87 aaKnown RBP11.87□□□□□ -0.51
SF1-216ENST00000486867 NUDT7P0C024 238 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 GP1BBP13224 206 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ETS2P15036 469 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 PRKCAP17252 672 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 CHRNB4P30926 498 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 STARP49675 285 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 RAC1P63000 192 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 MAPRE2Q15555 327 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ZSWIM7Q19AV6 140 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 TRMT5Q32P41 509 aaKnown RBP11.87□□□□□ -0.51
SF1-216ENST00000486867 RNF220Q5VTB9 566 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 POMZP3Q6PJE2 187 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 SPATA21Q7Z572 469 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 LILRB4Q8NHJ6 448 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ST8SIA1Q92185 356 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 TMEM19Q96HH6 336 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ADGRG7Q96K78 797 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ZFP3Q96NJ6 502 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 QRSL1Q9H0R6 528 aaKnown RBP11.87□□□□□ -0.51
SF1-216ENST00000486867 MYLK2Q9H1R3 596 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 DNAJB12Q9NXW2 375 aaKnown RBP11.87□□□□□ -0.51
SF1-216ENST00000486867 Q9UFV3 132 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 RNF6Q9Y252 685 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 VDAC3Q9Y277 283 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 CAPN7Q9Y6W3 813 aa11.87□□□□□ -0.51
SF1-216ENST00000486867 ANKHD1Q8IWZ3 2542 aaKnown RBP11.87□□□□□ -0.51
SF1-216ENST00000486867 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms