RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SGCBQ16585 318 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 GSTA3Q16772 222 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 EEF1A1P5Q5VTE0 462 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 AP1ARQ63HQ0 302 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 OR2A2Q6IF42 318 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 TYW3Q6IPR3 259 aaKnown RBP17.56■□□□□ 0.4
SNX5-213ENST00000486039 VWA1Q6PCB0 445 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 SPNS3Q6ZMD2 512 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 RNF130Q86XS8 419 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 OR10D3Q8NH80 312 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 LRRC8CQ8TDW0 803 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 RBM24Q9BX46 236 aaKnown RBP17.56■□□□□ 0.4
SNX5-213ENST00000486039 PIGMQ9H3S5 423 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 TMEM185BQ9H7F4 350 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 RNF122Q9H9V4 155 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 SDR39U1Q9NRG7 319 aaPredicted RBP17.56■□□□□ 0.4
SNX5-213ENST00000486039 ZIM2Q9NZV7 527 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 STOML1Q9UBI4 398 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 MED12LQ86YW9 2145 aa17.56■□□□□ 0.4
SNX5-213ENST00000486039 A0A0J9YW62 118 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 A8MXE2 369 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 HMGN4O00479 90 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 ADAMDEC1O15204 470 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 UBDO15205 165 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 ZNF264O43296 627 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 KIAA0513O60268 411 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 EIF4E2O60573 245 aaKnown RBP17.55■□□□□ 0.4
SNX5-213ENST00000486039 AQP8O94778 261 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 NUDT14O95848 222 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 IL6P05231 212 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 EIF1P41567 113 aaKnown RBP17.55■□□□□ 0.4
SNX5-213ENST00000486039 KIR2DL2P43627 348 aaPredicted RBP17.55■□□□□ 0.4
SNX5-213ENST00000486039 KHKP50053 298 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 RIPPLY3P57055 190 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 LRRC74AQ0VAA2 488 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 MAPK14Q16539 360 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 ATAD3BQ5T9A4 648 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 FRRS1Q6ZNA5 592 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 ZNF621Q6ZSS3 439 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 TMEM200AQ86VY9 491 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 TRIML2Q8N7C3 387 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 CNEP1R1Q8N9A8 125 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 OR9I1Q8NGQ6 314 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 RFWD2Q8NHY2 731 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 FBXO27Q8NI29 283 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 ROPN1LQ96C74 230 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 ZG16BQ96DA0 208 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 SAP130Q9H0E3 1048 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 VIPAS39Q9H9C1 493 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 SLC6A13Q9NSD5 602 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 ARGLU1Q9NWB6 273 aaPredicted RBP17.55■□□□□ 0.4
SNX5-213ENST00000486039 GALNT8Q9NY28 637 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 PACSIN3Q9UKS6 424 aa17.55■□□□□ 0.4
SNX5-213ENST00000486039 TNFSF11O14788 317 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 UBL4AP11441 157 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 PRKCAP17252 672 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 ADH6P28332 368 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 SHC1P29353 583 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 SLC6A8P48029 635 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 SORDQ00796 357 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 GUSBP1Q15486 140 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 ESPNLQ6ZVH7 1005 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 BTLAQ7Z6A9 289 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 KIF18BQ86Y91 864 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 OR5W2Q8NH69 310 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 OR2V1Q8NHB1 315 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 LINC01560Q8TB33 94 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 ARSGQ96EG1 525 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 LAT2Q9GZY6 243 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 POLE3Q9NRF9 147 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 WDR45Q9Y484 360 aa17.54■□□□□ 0.4
SNX5-213ENST00000486039 GPC6Q9Y625 555 aaPredicted RBP17.54■□□□□ 0.4
SNX5-213ENST00000486039 FAM221AA4D161 298 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 TUBAL3A6NHL2 446 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 HMGB1P1B2RPK0 211 aaPredicted RBP17.53■□□□□ 0.4
SNX5-213ENST00000486039 RFXANKO14593 260 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 CXCL13O43927 109 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 DNAJA2O60884 412 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 BCAS1O75363 584 aaPredicted RBP17.53■□□□□ 0.4
SNX5-213ENST00000486039 CTAG2O75638 210 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 NTN1O95631 604 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 ELK4P28324 431 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 CPA2P48052 419 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 SIRPAP78324 504 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 CHRNEQ04844 493 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 SKP2Q13309 424 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 FGFBP1Q14512 234 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 COX20Q5RI15 118 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 LILRA2Q8N149 483 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 ZNF619Q8N2I2 560 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 TMCO5AQ8N6Q1 288 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 ANKFN1Q8N957 763 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 TOR1AIP2Q8NFQ8 470 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 PNPT1Q8TCS8 783 aaKnown RBP17.53■□□□□ 0.4
SNX5-213ENST00000486039 FAM222BQ8WU58 562 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 KLHL15Q96M94 604 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 EBF4Q9BQW3 602 aa17.53■□□□□ 0.4
SNX5-213ENST00000486039 ETV2O00321 342 aaPredicted RBP17.52■□□□□ 0.4
SNX5-213ENST00000486039 MSTNO14793 375 aa17.52■□□□□ 0.4
SNX5-213ENST00000486039 SMNDC1O75940 238 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms