RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 TSC22D1Q15714 1073 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 TMEM176BQ3YBM2 270 aaPredicted RBP17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 KLHL26Q53HC5 615 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 PDSS1Q5T2R2 415 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 HMGN2P46Q86SG4 172 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 P3H2Q8IVL5 708 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 OR4A15Q8NGL6 344 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 COQ8BQ96D53 544 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 PERPQ96FX8 193 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 REXO5Q96IC2 774 aaKnown RBP17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 PAIP2Q9BPZ3 127 aaKnown RBP17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 BHLHE41Q9C0J9 482 aaPredicted RBP17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 SERHL2Q9H4I8 314 aa17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 BEX4Q9NWD9 120 aaPredicted RBP17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 NOP53Q9NZM5 478 aaKnown RBP17.17■□□□□ 0.34
NDUFA3-213ENST00000484103 C7orf72A4D263 438 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 ZNF195O14628 629 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 ADAMDEC1O15204 470 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 EFNA2O43921 213 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 SMPD2O60906 423 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 CPSF4O95639 269 aaKnown RBP17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 THBDP07204 575 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 KRT16P08779 473 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 MATN1P21941 496 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 ADSLP30566 484 aaPredicted RBP17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 LCN1P31025 176 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 P2RX1P51575 399 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 NME5P56597 212 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 ABCE1P61221 599 aaKnown RBP17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 Q5PR19 223 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 PDZK1Q5T2W1 519 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 STAC2Q6ZMT1 411 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 CXorf67Q86X51 503 aaPredicted RBP17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 RIMKLAQ8IXN7 391 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 ZNF619Q8N2I2 560 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 SFXN5Q8TD22 340 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 ZNF524Q96C55 264 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 DNAJA3Q96EY1 480 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 SLC35G5Q96KT7 338 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 AKTIPQ9H8T0 292 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 KCNK9Q9NPC2 374 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 MTORP42345 2549 aa17.16■□□□□ 0.34
NDUFA3-213ENST00000484103 CENPVL1A0A0U1RR11 272 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 A0A1W2PNR3 127 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 SERPINE1P05121 402 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 BGNP21810 368 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 AGTR1P30556 359 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 HOXC12P31275 282 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 ATP12AP54707 1039 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 EMX2Q04743 252 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 ACKR1Q16570 336 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 ZNF239Q16600 458 aaKnown RBP17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 NUFIP2Q7Z417 695 aaKnown RBP17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 C6orf120Q7Z4R8 191 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 KRTAP1-3Q8IUG1 177 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 POM121Q96HA1 1249 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 ACTR6Q9GZN1 396 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 C20orf27Q9GZN8 174 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 HOXD1Q9GZZ0 328 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 QRSL1Q9H0R6 528 aaKnown RBP17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 TMBIM4Q9HC24 238 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 HHATLQ9HCP6 504 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 DLL4Q9NR61 685 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 PLSCR4Q9NRQ2 329 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 PAQR5Q9NXK6 330 aaPredicted RBP17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 MKLN1Q9UL63 735 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 ICAM5Q9UMF0 924 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 DTNAQ9Y4J8 743 aa17.15■□□□□ 0.34
NDUFA3-213ENST00000484103 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 C9JVG2 144 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 PLAUP00749 431 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 UBL4AP11441 157 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 PRKCAP17252 672 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 EIF1P41567 113 aaKnown RBP17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 CLDN8P56748 225 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 OCRLQ01968 901 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 MAD2L1Q13257 205 aaPredicted RBP17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 QPRTQ15274 297 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 TNFAIP8L2Q6P589 184 aaPredicted RBP17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 C16orf62Q7Z3J2 963 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 MTERF4Q7Z6M4 381 aaKnown RBP17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 STK32CQ86UX6 486 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 TUSC5Q8IXB3 177 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 PSMA8Q8TAA3 256 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 GPR119Q8TDV5 335 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 RAB8BQ92930 207 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 ZNF775Q96BV0 537 aaPredicted RBP17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 SDF2Q99470 211 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 NUF2Q9BZD4 464 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 DPY30Q9C005 99 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 OR51I1Q9H343 314 aa17.14■□□□□ 0.33
NDUFA3-213ENST00000484103 SMAD7O15105 426 aaKnown RBP17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 FCMRO60667 390 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 MYZAPP0CAP1 466 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 UBTFL6P0CB48 400 aaPredicted RBP17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 SLC7A1P30825 629 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 SLC1A6P48664 564 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 TMEM201Q5SNT2 666 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 HOMEZQ8IX15 550 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms