RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 FAM198BQ6UWH4 519 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 PTCHD4Q6ZW05 846 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 TMPRSS11FQ6ZWK6 438 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 GTF2IRD2Q86UP8 949 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 OMA1Q96E52 524 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 ADOQ96SZ5 270 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 LPAR4Q99677 370 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 PRRX2Q99811 253 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 MESP1Q9BRJ9 268 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 CRB3Q9BUF7 120 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 KRCC1Q9NPI7 259 aaPredicted RBP12.9□□□□□ -0.34
CLK3-204ENST00000483723 CNIH4Q9P003 139 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 AKAP7Q9P0M2 348 aaPredicted RBP12.9□□□□□ -0.34
CLK3-204ENST00000483723 HEATR5AQ86XA9 2040 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 SCDO00767 359 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 ABCD3P28288 659 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 INSM1Q01101 510 aaPredicted RBP12.89□□□□□ -0.35
CLK3-204ENST00000483723 CD226Q15762 336 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 CNPY1Q3B7I2 92 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 HSDL2Q6YN16 418 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 PRSS48Q7RTY5 328 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 GPR141Q7Z602 305 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 MEX3DQ86XN8 651 aaKnown RBP12.89□□□□□ -0.35
CLK3-204ENST00000483723 FAM26EQ8N5C1 309 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 AMER2Q8N7J2 671 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 ZNF540Q8NDQ6 660 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 OR8D4Q8NGM9 314 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 OR8J1Q8NGP2 316 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 GGHQ92820 318 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 CCNL2Q96S94 520 aaPredicted RBP12.89□□□□□ -0.35
CLK3-204ENST00000483723 CDC6Q99741 560 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 POLDIP3Q9BY77 421 aaKnown RBP12.89□□□□□ -0.35
CLK3-204ENST00000483723 PLA2G12AQ9BZM1 189 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 LAT2Q9GZY6 243 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 DSN1Q9H410 356 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 EGLN3Q9H6Z9 239 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 TMEM9BQ9NQ34 198 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 C19orf25Q9UFG5 118 aaPredicted RBP12.89□□□□□ -0.35
CLK3-204ENST00000483723 MED31Q9Y3C7 131 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 SNX5Q9Y5X3 404 aa12.89□□□□□ -0.35
CLK3-204ENST00000483723 CDC14CA4D256 554 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 TMEM200CA6NKL6 621 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 CLCA1A8K7I4 914 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ALG1L2C9J202 215 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 CDC42EP2O14613 210 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 OIP5O43482 229 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 KLF7O75840 302 aaPredicted RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 ITIH1P19827 911 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ACVR2AP27037 513 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ETV5P41161 510 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 SLC15A1P46059 708 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 SMSP52788 366 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 SLC26A5P58743 744 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 EMX1Q04741 257 aaPredicted RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 SKP2Q13309 424 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 RAB39AQ14964 217 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 OCLNQ16625 522 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 KIF26BQ2KJY2 2108 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 NDUFAF6Q330K2 333 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 DESI1Q6ICB0 168 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 KIRREL2Q6UWL6 708 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 CASP12Q6UXS9 341 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 PRR22Q8IZ63 422 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 DNAJA4Q8WW22 397 aaPredicted RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 OSTF1Q92882 214 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 RHNO1Q9BSD3 238 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 EDEM2Q9BV94 578 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 MEPEQ9NQ76 525 aaPredicted RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 C20orf141Q9NUB4 165 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 CLN6Q9NWW5 311 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 TMEM5Q9Y2B1 443 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 OR6C70A6NIJ9 312 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ADAM10O14672 748 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ZNF264O43296 627 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 RGS10O43665 173 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 FADS1O60427 444 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ICOSLGO75144 302 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 RFPL3O75679 317 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 SEC14L2O76054 403 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 UBL4AP11441 157 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 HPGDP15428 266 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 MAKP20794 623 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ENDOUP21128 410 aaKnown RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 IL12BP29460 328 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 GPR4P46093 362 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 RAB15P59190 212 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 PLCXD2Q0VAA5 305 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ISXQ2M1V0 245 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 ALG10BQ5I7T1 473 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 SLC27A4Q6P1M0 643 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 FAM199XQ6PEV8 388 aaPredicted RBP12.88□□□□□ -0.35
CLK3-204ENST00000483723 ZNF620Q6ZNG0 422 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 PFN4Q8NHR9 129 aa12.88□□□□□ -0.35
CLK3-204ENST00000483723 TEX47Q8TBZ9 253 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms