RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TFPTP0C1Z6 253 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 ATP6V1B1P15313 513 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 GZMMP51124 257 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 EEFSECP57772 596 aaKnown RBP10.65□□□□□ -0.7
HPS4-212ENST00000481910 DNAL1Q4LDG9 190 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 CCDC58Q4VC31 144 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 IL20RBQ6UXL0 311 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 BNC2Q6ZN30 1099 aaPredicted RBP10.65□□□□□ -0.7
HPS4-212ENST00000481910 ANKFN1Q8N957 763 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 CHDHQ8NE62 594 aaPredicted RBP10.65□□□□□ -0.7
HPS4-212ENST00000481910 OR2T12Q8NG77 320 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 OR5M3Q8NGP4 307 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 DIO2Q92813 273 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 TMEM38AQ9H6F2 299 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 A4GALTQ9NPC4 353 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 FBXO34Q9NWN3 711 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 ACACBO00763 2458 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 CPAMD8Q8IZJ3 1885 aa10.65□□□□□ -0.7
HPS4-212ENST00000481910 C5orf58C9J3I9 102 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 MKRN2OSH3BPM6 223 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 MAGEB3O15480 346 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 SLC28A2O43868 658 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 FCMRO60667 390 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 STX11O75558 287 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PPM1BO75688 479 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 H6PDO95479 791 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 IL33O95760 270 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 WDPCPO95876 746 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 F10P00742 488 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 IGKV1D-16P01601 117 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 POU2F1P14859 743 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 TCN1P20061 433 aaPredicted RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 SLC9A3P48764 834 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 CYB561P49447 251 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 CRISP3P54108 245 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PNLIPRP2P54317 469 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 EEF1A1P68104 462 aaKnown RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 CDK6Q00534 326 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 OC90Q02509 493 aaPredicted RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 FUT5Q11128 374 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 MFAP5Q13361 173 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 ZNF630Q2M218 657 aaPredicted RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 VMACQ2NL98 169 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 SAMD4BQ5PRF9 694 aaKnown RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 ZNF468Q5VIY5 522 aaPredicted RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 EEF1A1P5Q5VTE0 462 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 LYPD8Q6UX82 237 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PLEKHM3Q6ZWE6 761 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 OLIG3Q7RTU3 272 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 CALHM3Q86XJ0 350 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PTOV1Q86YD1 416 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 P3H2Q8IVL5 708 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 C11orf65Q8NCR3 313 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 FAM13CQ8NE31 585 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 NFKBIDQ8NI38 313 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 FAM110BQ8TC76 370 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 SPACA9Q96E40 222 aaPredicted RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 COL21A1Q96P44 957 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 TRNT1Q96Q11 434 aaKnown RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 SMAD5Q99717 465 aaKnown RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 KCTD14Q9BQ13 255 aaPredicted RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 UTP23Q9BRU9 249 aaKnown RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 THTPAQ9BU02 230 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 SPATA9Q9BWV2 254 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 TBC1D23Q9NUY8 699 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 HPF1Q9NWY4 346 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PLA2G3Q9NZ20 509 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 SH3BGRL2Q9UJC5 107 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 NUP50Q9UKX7 468 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 MKLN1Q9UL63 735 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 USP22Q9UPT9 525 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PCDHGA9Q9Y5G4 932 aaKnown RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 PRORSD1PA6NEY8 169 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 TSPAN2O60636 221 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 UGT2B11O75310 529 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 ARAFP10398 606 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 CD96P40200 585 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 CASRP41180 1078 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 GSK3BP49841 420 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 HLCSP50747 726 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 FBXW4P57775 412 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 NCALDP61601 193 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 RBBP4Q09028 425 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 SCARB2Q14108 478 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 GPR68Q15743 365 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.64□□□□□ -0.71
HPS4-212ENST00000481910 ZNF791Q3KP31 576 aaPredicted RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 AARDQ4LEZ3 155 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 DESI1Q6ICB0 168 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 REEP3Q6NUK4 255 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 ERICH5Q6P6B1 374 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 C19orf48Q6RUI8 117 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 ZZZ3Q8IYH5 903 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 TMEM19Q96HH6 336 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PIP5K1AQ99755 562 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 ZNF350Q9GZX5 532 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PRORYQ9H606 182 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 CALML5Q9NZT1 146 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 GMPR2Q9P2T1 348 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms