RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, human

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN9-204	ENST00000480004	GRIP1	Q9Y3R0	1128 aa		4.54	□□□□□ -1.68
CAPN9-204	ENST00000480004	GOLGA8Q	A0A0J9YX86	632 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GOLGA8O	A6NCC3	632 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	OR6C70	A6NIJ9	312 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004		B4DSR2	109 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004		E7EQL1	145 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GOLGA8N	F8WBI6	632 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GOLGA8R	I6L899	631 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004		M0QYG6	137 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CLGN	O14967	610 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	PIP5K1C	O60331	668 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	TRIM13	O60858	407 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GCM2	O75603	506 aa	Predicted RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	BCL10	O95999	233 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CLPS	P04118	112 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GYPC	P04921	128 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	TPM1	P09493	284 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	HK1	P19367	917 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	SLC6A2	P23975	617 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	SERPINB1	P30740	379 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	APOBEC3A	P31941	199 aa	Predicted RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	KRT20	P35900	424 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	SSR2	P43308	183 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	ARFIP1	P53367	373 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CDH15	P55291	814 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	UCP3	P55916	312 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	UBASH3A	P57075	661 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	B3GALT5-AS1	P59052	145 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	PSPH	P78330	225 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CDK16	Q00536	496 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	TNFRSF17	Q02223	184 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	SLAMF1	Q13291	335 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	DHX34	Q14147	1143 aa	Known RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	EFR3A	Q14156	821 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	PPA1	Q15181	289 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	TIMM23B	Q5SRD1	257 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	PDSS1	Q5T2R2	415 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	ZNF549	Q6P9A3	640 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CES3	Q6UWW8	571 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GLCCI1	Q86VQ1	547 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GABRG1	Q8N1C3	465 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	ZNF615	Q8N8J6	731 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	OR52B6	Q8NGF0	335 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	TBC1D15	Q8TC07	691 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	HTRA1	Q92743	480 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	UBE2E3	Q969T4	207 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	LINGO1	Q96FE5	620 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	REXO5	Q96IC2	774 aa	Known RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	COL21A1	Q96P44	957 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	OR14A2	Q96R54	314 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	F2RL3	Q96RI0	385 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	EGFL8	Q99944	293 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	PKP2	Q99959	881 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	INPP5K	Q9BT40	448 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	LRRC1	Q9BTT6	524 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	NXF5	Q9H1B4	397 aa	Known RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	GOLPH3	Q9H4A6	298 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	FKRP	Q9H9S5	495 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CXorf21	Q9HAI6	301 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	NTN4	Q9HB63	628 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	FOLH1B	Q9HBA9	442 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CLEC4A	Q9UMR7	237 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	ZNF337	Q9Y3M9	751 aa		4.53	□□□□□ -1.68
CAPN9-204	ENST00000480004	CCDC189	A1A4V9	331 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	GOLGA8M	H3BSY2	632 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	UGT2B11	O75310	529 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	REM1	O75628	298 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	WDR47	O94967	919 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	TBX6	O95947	436 aa	Predicted RBP	4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	ADA	P00813	363 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	TPM3	P06753	285 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	ERCC1	P07992	297 aa	Predicted RBP	4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	TACSTD2	P09758	323 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	DDX5	P17844	614 aa	Known RBP	4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	DRD5	P21918	477 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	GPX3	P22352	226 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	TCEA1	P23193	301 aa	Known RBP	4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	GCSH	P23434	173 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	CNTF	P26441	200 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	PIK3R1	P27986	724 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	AGTR1	P30556	359 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	MAGEA1	P43355	309 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	PPIC	P45877	212 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	ALDH9A1	P49189	494 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	CLK3	P49761	638 aa	Known RBP	4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	PTTG1IP	P53801	180 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	CLDN20	P56880	219 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	CDKL1	Q00532	357 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	BLMH	Q13867	455 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	RNPS1	Q15287	305 aa	Known RBP	4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	STK11	Q15831	433 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	OR5M10	Q6IEU7	315 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	OR4C11	Q6IEV9	310 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	RBMS3	Q6XE24	437 aa	Known RBP	4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	TDRP	Q86YL5	185 aa		4.52	□□□□□ -1.69
CAPN9-204	ENST00000480004	DENND6A	Q8IWF6	608 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms